Human urinary biomarkers of dioxin exposure: analysis by metabolomics and biologically driven data dimensionality reduction.
Untargeted metabolomic approaches offer new opportunities for a deeper understanding of the molecular events related to toxic exposure. This study proposes a metabolomic investigation of biochemical alterations occurring in urine as a result of dioxin toxicity. Urine samples were collected from Czech chemical workers submitted to severe dioxin occupational exposure in a herbicide production plant in the late 1960s. Experiments were carried out with ultra-high pressure liquid chromatography (UHPLC) coupled to high-resolution quadrupole time-of-flight (QTOF) mass spectrometry. A chemistry-driven feature selection was applied to focus on steroid-related metabolites. Supervised multivariate data analysis allowed biomarkers, mainly related to bile acids, to be highlighted. These results supported the hypothesis of liver damage and oxidative stress for long-term dioxin toxicity. As a second step of data analysis, the information gained from the urine analysis of Victor Yushchenko after his poisoning was examined. A subset of relevant urinary markers of acute dioxin toxicity from this extreme phenotype, including glucuro- and sulfo-conjugated endogenous steroid metabolites and bile acids, was assessed for its ability to detect long-term effects of exposure. The metabolomic strategy presented in this work allowed the determination of metabolic patterns related to dioxin effects in human and the discovery of highly predictive subsets of biologically meaningful and clinically relevant compounds. These results are expected to provide valuable information for a deeper understanding of the molecular events related to dioxin toxicity. Furthermore, it presents an original methodology of data dimensionality reduction by using extreme phenotype as a guide to select relevant features prior to data modeling (biologically driven data reduction).
['Jeanneret|Fabienne|F|', 'Boccard|Julien|J|', 'Badoud|Flavia|F|', 'Sorg|Olivier|O|', 'Tonoli|David|D|', 'Pelclova|Daniela|D|', 'Vlckova|Stepanka|S|', 'Rutledge|Douglas N|DN|', 'Samer|Caroline F|CF|', 'Hochstrasser|Denis|D|', 'Saurat|Jean-Hilaire|JH|', 'Rudaz|Serge|S|']
D015415:Biomarkers D002851:Chromatography, High Pressure Liquid D057225:Data Mining D004784:Environmental Monitoring D006801:Humans D008099:Liver D055432:Metabolomics D016273:Occupational Exposure D018384:Oxidative Stress D000072317:Polychlorinated Dibenzodioxins
Biomarkers Dioxin Dimensionality reduction Toxicity Extreme phenotype Steroidomics