Complete genome sequence of a marine-derived bacterium Pseudomonas sp. SXM-1 and characterization of its siderophore through antiSMASH analysis and with mass spectroscopic method.
Pseudomonas sp. SXM-1, isolated from coastal sea water of Xiamen Bay, could produce extracellular pyoverdine. Here, we present the complete genome of Pseudomonas sp. SXM-1, which will facilitate the genome mining of the pyoverdine synthetase coding gene cluster. The sequenced genome, a circular chromosome, is 7,226,716 bp in length, which contains 60.78% of GC bases, 6549 proteins, 67 tRNAs, and 16 rRNA encoding genes. The structure of pyoverdine produced by Pseudomonas sp. SXM-1 was predicted by using the antiSMASH 5.1.2 tool and further characterized with mass spectroscopic method.
['Guo|Wenbin|W|', 'Li|Fang|F|', 'Xia|Jinmei|J|', 'Wang|Weiyi|W|']
D019295:Computational Biology D016680:Genome, Bacterial D013058:Mass Spectrometry D011549:Pseudomonas D017262:Siderophores D000073336:Whole Genome Sequencing
Genome Pseudomonas Pyoverdine