Comparative analysis of serum proteome in congenital scoliosis patients with TBX6 haploinsufficiency - a first report pointing to lipid metabolism.
Congenital scoliosis (CS) is a three-dimensional deformity of the spine affecting quality of life. We have demonstrated TBX6 haploinsufficiency is the most important contributor to CS. However, the pathophysiology at the protein level remains unclear. Therefore, this study was to explore the differential proteome in serum of CS patients with TBX6 haploinsufficiency. Sera from nine CS patients with TBX6 haploinsufficiency and nine age- and gender-matched healthy controls were collected and analysed by isobaric tagged relative and absolute quantification (iTRAQ) labelling coupled with mass spectrometry (MS). In total, 277 proteins were detected and 20 proteins were designated as differentially expressed proteins, which were submitted to subsequent bioinformatics analysis. Gene Ontology classification analysis showed the biological process was primarily related to 'cellular process', molecular function 'structural molecule activity' and cellular component 'extracellular region'. IPA analysis revealed 'LXR/RXR activation' was the top pathway, which is a crucial pathway in lipid metabolism. Hierarchical clustering analysis generated two clusters. In summary, this study is the first proteomic research to delineate the total and differential serum proteins in TBX6 haploinsufficiency-caused CS. The proteins discovered in this experiment may serve as potential biomarkers for CS, and lipid metabolism might play important roles in the pathogenesis of CS.
['Zhu|Qiankun|Q|', 'Wu|Nan|N|0000-0003-4137-2030', 'Liu|Gang|G|', 'Zhou|Yangzhong|Y|', 'Liu|Sen|S|', 'Chen|Jun|J|', 'Liu|Jiaqi|J|', 'Zuo|Yuzhi|Y|', 'Liu|Zhenlei|Z|', 'Chen|Weisheng|W|', 'Chen|Yixin|Y|', 'Chen|Jia|J|', 'Lin|Mao|M|', 'Zhao|Yanxue|Y|', 'Yang|Yang|Y|', 'Wang|Shensgru|S|', 'Yang|Xu|X|', 'Ma|Yufen|Y|', 'Wang|Jian|J|', 'Chen|Xiaoli|X|', 'Zhang|Jianguo|J|', 'Shen|Jianxiong|J|', 'Wu|Zhihong|Z|', 'Qiu|Guixing|G|']
D016022:Case-Control Studies D016000:Cluster Analysis D063990:Gene Ontology D057895:Haploinsufficiency D006801:Humans D050356:Lipid Metabolism D020543:Proteome D012600:Scoliosis D020825:T-Box Domain Proteins
proteomics congenital scoliosis TBX6 lipid metabolism isobaric tagged relative and absolute quantification