--- language: - en bigbio_language: - English license: other multilinguality: monolingual bigbio_license_shortname: GENIA_PROJECT_LICENSE pretty_name: BioNLP 2013 PC homepage: https://github.com/openbiocorpora/bionlp-st-2013-pc bigbio_pubmed: True bigbio_public: True bigbio_tasks: - EVENT_EXTRACTION - NAMED_ENTITY_RECOGNITION - COREFERENCE_RESOLUTION --- # Dataset Card for BioNLP 2013 PC ## Dataset Description - **Homepage:** https://github.com/openbiocorpora/bionlp-st-2013-pc - **Pubmed:** True - **Public:** True - **Tasks:** EE,NER,COREF the Pathway Curation (PC) task is a main event extraction task of the BioNLP shared task (ST) 2013. The PC task concerns the automatic extraction of biomolecular reactions from text. The task setting, representation and semantics are defined with respect to pathway model standards and ontologies (SBML, BioPAX, SBO) and documents selected by relevance to specific model reactions. Two BioNLP ST 2013 participants successfully completed the PC task. The highest achieved F-score, 52.8%, indicates that event extraction is a promising approach to supporting pathway curation efforts. ## Citation Information ``` @inproceedings{ohta-etal-2013-overview, title = "Overview of the Pathway Curation ({PC}) task of {B}io{NLP} Shared Task 2013", author = "Ohta, Tomoko and Pyysalo, Sampo and Rak, Rafal and Rowley, Andrew and Chun, Hong-Woo and Jung, Sung-Jae and Choi, Sung-Pil and Ananiadou, Sophia and Tsujii, Jun{'}ichi", booktitle = "Proceedings of the {B}io{NLP} Shared Task 2013 Workshop", month = aug, year = "2013", address = "Sofia, Bulgaria", publisher = "Association for Computational Linguistics", url = "https://aclanthology.org/W13-2009", pages = "67--75", } ```