anno_start anno_end anno_text entity_type sentence section 0 9 Structure evidence Structure of the Dual-Mode Wnt Regulator Kremen1 and Insight into Ternary Complex Formation with LRP6 and Dickkopf TITLE 27 30 Wnt protein_type Structure of the Dual-Mode Wnt Regulator Kremen1 and Insight into Ternary Complex Formation with LRP6 and Dickkopf TITLE 41 48 Kremen1 protein Structure of the Dual-Mode Wnt Regulator Kremen1 and Insight into Ternary Complex Formation with LRP6 and Dickkopf TITLE 97 101 LRP6 protein Structure of the Dual-Mode Wnt Regulator Kremen1 and Insight into Ternary Complex Formation with LRP6 and Dickkopf TITLE 106 114 Dickkopf protein_type Structure of the Dual-Mode Wnt Regulator Kremen1 and Insight into Ternary Complex Formation with LRP6 and Dickkopf TITLE 0 14 Kremen 1 and 2 protein_type Kremen 1 and 2 have been identified as co-receptors for Dickkopf (Dkk) proteins, hallmark secreted antagonists of canonical Wnt signaling. ABSTRACT 39 51 co-receptors protein_type Kremen 1 and 2 have been identified as co-receptors for Dickkopf (Dkk) proteins, hallmark secreted antagonists of canonical Wnt signaling. ABSTRACT 56 64 Dickkopf protein_type Kremen 1 and 2 have been identified as co-receptors for Dickkopf (Dkk) proteins, hallmark secreted antagonists of canonical Wnt signaling. ABSTRACT 66 69 Dkk protein_type Kremen 1 and 2 have been identified as co-receptors for Dickkopf (Dkk) proteins, hallmark secreted antagonists of canonical Wnt signaling. ABSTRACT 124 127 Wnt protein_type Kremen 1 and 2 have been identified as co-receptors for Dickkopf (Dkk) proteins, hallmark secreted antagonists of canonical Wnt signaling. ABSTRACT 22 40 crystal structures evidence We present here three crystal structures of the ectodomain of human Kremen1 (KRM1ECD) at resolutions between 1.9 and 3.2 Å. KRM1ECD emerges as a rigid molecule with tight interactions stabilizing a triangular arrangement of its Kringle, WSC, and CUB structural domains. ABSTRACT 48 58 ectodomain structure_element We present here three crystal structures of the ectodomain of human Kremen1 (KRM1ECD) at resolutions between 1.9 and 3.2 Å. KRM1ECD emerges as a rigid molecule with tight interactions stabilizing a triangular arrangement of its Kringle, WSC, and CUB structural domains. ABSTRACT 62 67 human species We present here three crystal structures of the ectodomain of human Kremen1 (KRM1ECD) at resolutions between 1.9 and 3.2 Å. KRM1ECD emerges as a rigid molecule with tight interactions stabilizing a triangular arrangement of its Kringle, WSC, and CUB structural domains. ABSTRACT 68 75 Kremen1 protein We present here three crystal structures of the ectodomain of human Kremen1 (KRM1ECD) at resolutions between 1.9 and 3.2 Å. KRM1ECD emerges as a rigid molecule with tight interactions stabilizing a triangular arrangement of its Kringle, WSC, and CUB structural domains. ABSTRACT 77 81 KRM1 protein We present here three crystal structures of the ectodomain of human Kremen1 (KRM1ECD) at resolutions between 1.9 and 3.2 Å. KRM1ECD emerges as a rigid molecule with tight interactions stabilizing a triangular arrangement of its Kringle, WSC, and CUB structural domains. ABSTRACT 81 84 ECD structure_element We present here three crystal structures of the ectodomain of human Kremen1 (KRM1ECD) at resolutions between 1.9 and 3.2 Å. KRM1ECD emerges as a rigid molecule with tight interactions stabilizing a triangular arrangement of its Kringle, WSC, and CUB structural domains. ABSTRACT 124 128 KRM1 protein We present here three crystal structures of the ectodomain of human Kremen1 (KRM1ECD) at resolutions between 1.9 and 3.2 Å. KRM1ECD emerges as a rigid molecule with tight interactions stabilizing a triangular arrangement of its Kringle, WSC, and CUB structural domains. ABSTRACT 128 131 ECD structure_element We present here three crystal structures of the ectodomain of human Kremen1 (KRM1ECD) at resolutions between 1.9 and 3.2 Å. KRM1ECD emerges as a rigid molecule with tight interactions stabilizing a triangular arrangement of its Kringle, WSC, and CUB structural domains. ABSTRACT 198 220 triangular arrangement protein_state We present here three crystal structures of the ectodomain of human Kremen1 (KRM1ECD) at resolutions between 1.9 and 3.2 Å. KRM1ECD emerges as a rigid molecule with tight interactions stabilizing a triangular arrangement of its Kringle, WSC, and CUB structural domains. ABSTRACT 228 235 Kringle structure_element We present here three crystal structures of the ectodomain of human Kremen1 (KRM1ECD) at resolutions between 1.9 and 3.2 Å. KRM1ECD emerges as a rigid molecule with tight interactions stabilizing a triangular arrangement of its Kringle, WSC, and CUB structural domains. ABSTRACT 237 240 WSC structure_element We present here three crystal structures of the ectodomain of human Kremen1 (KRM1ECD) at resolutions between 1.9 and 3.2 Å. KRM1ECD emerges as a rigid molecule with tight interactions stabilizing a triangular arrangement of its Kringle, WSC, and CUB structural domains. ABSTRACT 246 249 CUB structure_element We present here three crystal structures of the ectodomain of human Kremen1 (KRM1ECD) at resolutions between 1.9 and 3.2 Å. KRM1ECD emerges as a rigid molecule with tight interactions stabilizing a triangular arrangement of its Kringle, WSC, and CUB structural domains. ABSTRACT 4 14 structures evidence The structures reveal an unpredicted homology of the WSC domain to hepatocyte growth factor. ABSTRACT 53 56 WSC structure_element The structures reveal an unpredicted homology of the WSC domain to hepatocyte growth factor. ABSTRACT 67 91 hepatocyte growth factor protein_type The structures reveal an unpredicted homology of the WSC domain to hepatocyte growth factor. ABSTRACT 80 83 Wnt protein_type We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 84 95 co-receptor protein_type We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 96 102 Lrp5/6 protein_type We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 104 107 Dkk protein_type We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 113 116 Krm protein_type We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 159 176 crystal structure evidence We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 185 221 β-propeller/EGF repeats (PE) 3 and 4 structure_element We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 229 232 Wnt protein_type We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 233 244 co-receptor protein_type We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 245 249 LRP6 protein We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 251 255 LRP6 protein We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 255 261 PE3PE4 structure_element We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 268 290 cysteine-rich domain 2 structure_element We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 292 296 CRD2 structure_element We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 301 305 DKK1 protein We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 311 315 KRM1 protein We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 315 318 ECD structure_element We further report the general architecture of the ternary complex formed by the Wnt co-receptor Lrp5/6, Dkk, and Krm, determined from a low-resolution complex crystal structure between β-propeller/EGF repeats (PE) 3 and 4 of the Wnt co-receptor LRP6 (LRP6PE3PE4), the cysteine-rich domain 2 (CRD2) of DKK1, and KRM1ECD. ABSTRACT 0 4 DKK1 protein DKK1CRD2 is sandwiched between LRP6PE3 and KRM1Kringle-WSC. ABSTRACT 4 8 CRD2 structure_element DKK1CRD2 is sandwiched between LRP6PE3 and KRM1Kringle-WSC. ABSTRACT 31 35 LRP6 protein DKK1CRD2 is sandwiched between LRP6PE3 and KRM1Kringle-WSC. ABSTRACT 35 38 PE3 structure_element DKK1CRD2 is sandwiched between LRP6PE3 and KRM1Kringle-WSC. ABSTRACT 43 47 KRM1 protein DKK1CRD2 is sandwiched between LRP6PE3 and KRM1Kringle-WSC. ABSTRACT 47 58 Kringle-WSC structure_element DKK1CRD2 is sandwiched between LRP6PE3 and KRM1Kringle-WSC. ABSTRACT 0 8 Modeling experimental_method Modeling studies supported by surface plasmon resonance suggest a direct interaction site between Krm1CUB and Lrp6PE2. ABSTRACT 30 55 surface plasmon resonance experimental_method Modeling studies supported by surface plasmon resonance suggest a direct interaction site between Krm1CUB and Lrp6PE2. ABSTRACT 73 89 interaction site site Modeling studies supported by surface plasmon resonance suggest a direct interaction site between Krm1CUB and Lrp6PE2. ABSTRACT 98 102 Krm1 protein Modeling studies supported by surface plasmon resonance suggest a direct interaction site between Krm1CUB and Lrp6PE2. ABSTRACT 102 105 CUB structure_element Modeling studies supported by surface plasmon resonance suggest a direct interaction site between Krm1CUB and Lrp6PE2. ABSTRACT 110 114 Lrp6 protein Modeling studies supported by surface plasmon resonance suggest a direct interaction site between Krm1CUB and Lrp6PE2. ABSTRACT 114 117 PE2 structure_element Modeling studies supported by surface plasmon resonance suggest a direct interaction site between Krm1CUB and Lrp6PE2. ABSTRACT 4 13 structure evidence The structure of the KREMEN 1 ectodomain is solved from three crystal forms ABSTRACT 21 29 KREMEN 1 protein The structure of the KREMEN 1 ectodomain is solved from three crystal forms ABSTRACT 30 40 ectodomain structure_element The structure of the KREMEN 1 ectodomain is solved from three crystal forms ABSTRACT 44 50 solved experimental_method The structure of the KREMEN 1 ectodomain is solved from three crystal forms ABSTRACT 62 75 crystal forms evidence The structure of the KREMEN 1 ectodomain is solved from three crystal forms ABSTRACT 0 7 Kringle structure_element Kringle, WSC, and CUB subdomains interact tightly to form a single structural unit ABSTRACT 9 12 WSC structure_element Kringle, WSC, and CUB subdomains interact tightly to form a single structural unit ABSTRACT 18 21 CUB structure_element Kringle, WSC, and CUB subdomains interact tightly to form a single structural unit ABSTRACT 4 13 interface site The interface to DKKs is formed from the Kringle and WSC domains ABSTRACT 17 21 DKKs protein_type The interface to DKKs is formed from the Kringle and WSC domains ABSTRACT 41 48 Kringle structure_element The interface to DKKs is formed from the Kringle and WSC domains ABSTRACT 53 56 WSC structure_element The interface to DKKs is formed from the Kringle and WSC domains ABSTRACT 4 7 CUB structure_element The CUB domain is found to interact directly with LRP6PE1PE2 ABSTRACT 50 54 LRP6 protein The CUB domain is found to interact directly with LRP6PE1PE2 ABSTRACT 54 60 PE1PE2 structure_element The CUB domain is found to interact directly with LRP6PE1PE2 ABSTRACT 28 38 ectodomain structure_element Zebisch et al. describe the ectodomain structure of KREMEN 1, a receptor for Wnt antagonists of the DKK family. ABSTRACT 39 48 structure evidence Zebisch et al. describe the ectodomain structure of KREMEN 1, a receptor for Wnt antagonists of the DKK family. ABSTRACT 52 60 KREMEN 1 protein Zebisch et al. describe the ectodomain structure of KREMEN 1, a receptor for Wnt antagonists of the DKK family. ABSTRACT 64 72 receptor protein_type Zebisch et al. describe the ectodomain structure of KREMEN 1, a receptor for Wnt antagonists of the DKK family. ABSTRACT 77 80 Wnt protein_type Zebisch et al. describe the ectodomain structure of KREMEN 1, a receptor for Wnt antagonists of the DKK family. ABSTRACT 100 103 DKK protein_type Zebisch et al. describe the ectodomain structure of KREMEN 1, a receptor for Wnt antagonists of the DKK family. ABSTRACT 0 3 Apo protein_state Apo structures and a complex with functional fragments of DKK1 and LRP6 shed light on the function of this dual-mode regulator of Wnt signaling. ABSTRACT 4 14 structures evidence Apo structures and a complex with functional fragments of DKK1 and LRP6 shed light on the function of this dual-mode regulator of Wnt signaling. ABSTRACT 21 33 complex with protein_state Apo structures and a complex with functional fragments of DKK1 and LRP6 shed light on the function of this dual-mode regulator of Wnt signaling. ABSTRACT 34 54 functional fragments protein_state Apo structures and a complex with functional fragments of DKK1 and LRP6 shed light on the function of this dual-mode regulator of Wnt signaling. ABSTRACT 58 62 DKK1 protein Apo structures and a complex with functional fragments of DKK1 and LRP6 shed light on the function of this dual-mode regulator of Wnt signaling. ABSTRACT 67 71 LRP6 protein Apo structures and a complex with functional fragments of DKK1 and LRP6 shed light on the function of this dual-mode regulator of Wnt signaling. ABSTRACT 130 133 Wnt protein_type Apo structures and a complex with functional fragments of DKK1 and LRP6 shed light on the function of this dual-mode regulator of Wnt signaling. ABSTRACT 13 16 Wnt protein_type Signaling by Wnt morphogens is renowned for its fundamental roles in embryonic development, tissue homeostasis, and stem cell maintenance. INTRO 68 71 Wnt protein_type Due to these functions, generation, delivery, and interpretation of Wnt signals are all heavily regulated in the animal body. INTRO 0 10 Vertebrate taxonomy_domain Vertebrate Dickkopf proteins (Dkk1, 2, and 4) are one of many secreted antagonists of Wnt and function by blocking access to the Wnt co-receptor LRP5/6. INTRO 11 19 Dickkopf protein_type Vertebrate Dickkopf proteins (Dkk1, 2, and 4) are one of many secreted antagonists of Wnt and function by blocking access to the Wnt co-receptor LRP5/6. INTRO 30 34 Dkk1 protein_type Vertebrate Dickkopf proteins (Dkk1, 2, and 4) are one of many secreted antagonists of Wnt and function by blocking access to the Wnt co-receptor LRP5/6. INTRO 36 37 2 protein_type Vertebrate Dickkopf proteins (Dkk1, 2, and 4) are one of many secreted antagonists of Wnt and function by blocking access to the Wnt co-receptor LRP5/6. INTRO 43 44 4 protein_type Vertebrate Dickkopf proteins (Dkk1, 2, and 4) are one of many secreted antagonists of Wnt and function by blocking access to the Wnt co-receptor LRP5/6. INTRO 86 89 Wnt protein_type Vertebrate Dickkopf proteins (Dkk1, 2, and 4) are one of many secreted antagonists of Wnt and function by blocking access to the Wnt co-receptor LRP5/6. INTRO 129 132 Wnt protein_type Vertebrate Dickkopf proteins (Dkk1, 2, and 4) are one of many secreted antagonists of Wnt and function by blocking access to the Wnt co-receptor LRP5/6. INTRO 133 144 co-receptor protein_type Vertebrate Dickkopf proteins (Dkk1, 2, and 4) are one of many secreted antagonists of Wnt and function by blocking access to the Wnt co-receptor LRP5/6. INTRO 145 151 LRP5/6 protein Vertebrate Dickkopf proteins (Dkk1, 2, and 4) are one of many secreted antagonists of Wnt and function by blocking access to the Wnt co-receptor LRP5/6. INTRO 0 6 Kremen protein_type Kremen proteins (Krm1 and Krm2) have been identified as additional high-affinity transmembrane receptors for Dkk. INTRO 17 21 Krm1 protein_type Kremen proteins (Krm1 and Krm2) have been identified as additional high-affinity transmembrane receptors for Dkk. INTRO 26 30 Krm2 protein_type Kremen proteins (Krm1 and Krm2) have been identified as additional high-affinity transmembrane receptors for Dkk. INTRO 81 104 transmembrane receptors protein_type Kremen proteins (Krm1 and Krm2) have been identified as additional high-affinity transmembrane receptors for Dkk. INTRO 109 112 Dkk protein_type Kremen proteins (Krm1 and Krm2) have been identified as additional high-affinity transmembrane receptors for Dkk. INTRO 0 3 Krm protein_type Krm and Dkk synergize in Wnt inhibition during Xenopus embryogenesis to regulate anterior-posterior patterning. INTRO 8 11 Dkk protein_type Krm and Dkk synergize in Wnt inhibition during Xenopus embryogenesis to regulate anterior-posterior patterning. INTRO 25 28 Wnt protein_type Krm and Dkk synergize in Wnt inhibition during Xenopus embryogenesis to regulate anterior-posterior patterning. INTRO 47 54 Xenopus taxonomy_domain Krm and Dkk synergize in Wnt inhibition during Xenopus embryogenesis to regulate anterior-posterior patterning. INTRO 43 54 presence of protein_state Mechanistically it is thought that, in the presence of Dkk, Krm forms a ternary complex with Lrp6, which is then rapidly endocytosed. INTRO 55 58 Dkk protein_type Mechanistically it is thought that, in the presence of Dkk, Krm forms a ternary complex with Lrp6, which is then rapidly endocytosed. INTRO 60 63 Krm protein_type Mechanistically it is thought that, in the presence of Dkk, Krm forms a ternary complex with Lrp6, which is then rapidly endocytosed. INTRO 80 92 complex with protein_state Mechanistically it is thought that, in the presence of Dkk, Krm forms a ternary complex with Lrp6, which is then rapidly endocytosed. INTRO 93 97 Lrp6 protein_type Mechanistically it is thought that, in the presence of Dkk, Krm forms a ternary complex with Lrp6, which is then rapidly endocytosed. INTRO 29 32 Wnt protein_type This amplifies the intrinsic Wnt antagonistic activity of Dkk by efficiently depleting the cell surface of the Wnt co-receptor. INTRO 58 61 Dkk protein_type This amplifies the intrinsic Wnt antagonistic activity of Dkk by efficiently depleting the cell surface of the Wnt co-receptor. INTRO 111 114 Wnt protein_type This amplifies the intrinsic Wnt antagonistic activity of Dkk by efficiently depleting the cell surface of the Wnt co-receptor. INTRO 115 126 co-receptor protein_type This amplifies the intrinsic Wnt antagonistic activity of Dkk by efficiently depleting the cell surface of the Wnt co-receptor. INTRO 25 29 Krm1 protein_type In accordance with this, Krm1−/− and Krm2−/− double knockout mice show a high bone mass phenotype typical of increased Wnt signaling, as well as growth of ectopic forelimb digits. INTRO 37 41 Krm2 protein_type In accordance with this, Krm1−/− and Krm2−/− double knockout mice show a high bone mass phenotype typical of increased Wnt signaling, as well as growth of ectopic forelimb digits. INTRO 45 60 double knockout experimental_method In accordance with this, Krm1−/− and Krm2−/− double knockout mice show a high bone mass phenotype typical of increased Wnt signaling, as well as growth of ectopic forelimb digits. INTRO 61 65 mice taxonomy_domain In accordance with this, Krm1−/− and Krm2−/− double knockout mice show a high bone mass phenotype typical of increased Wnt signaling, as well as growth of ectopic forelimb digits. INTRO 119 122 Wnt protein_type In accordance with this, Krm1−/− and Krm2−/− double knockout mice show a high bone mass phenotype typical of increased Wnt signaling, as well as growth of ectopic forelimb digits. INTRO 69 72 dkk protein_type Growth of ectopic digits is further enhanced upon additional loss of dkk expression. INTRO 4 7 Wnt protein_type The Wnt antagonistic activity of Krm1 is also linked to its importance for correct thymus epithelium formation in mice. INTRO 33 37 Krm1 protein_type The Wnt antagonistic activity of Krm1 is also linked to its importance for correct thymus epithelium formation in mice. INTRO 114 118 mice taxonomy_domain The Wnt antagonistic activity of Krm1 is also linked to its importance for correct thymus epithelium formation in mice. INTRO 18 24 intact protein_state The importance of intact KRM1 for normal human development and health is highlighted by the recent finding that a homozygous mutation in the ectodomain of KRM1 leads to severe ectodermal dysplasia including oligodontia. INTRO 25 29 KRM1 protein The importance of intact KRM1 for normal human development and health is highlighted by the recent finding that a homozygous mutation in the ectodomain of KRM1 leads to severe ectodermal dysplasia including oligodontia. INTRO 41 46 human species The importance of intact KRM1 for normal human development and health is highlighted by the recent finding that a homozygous mutation in the ectodomain of KRM1 leads to severe ectodermal dysplasia including oligodontia. INTRO 141 151 ectodomain structure_element The importance of intact KRM1 for normal human development and health is highlighted by the recent finding that a homozygous mutation in the ectodomain of KRM1 leads to severe ectodermal dysplasia including oligodontia. INTRO 155 159 KRM1 protein The importance of intact KRM1 for normal human development and health is highlighted by the recent finding that a homozygous mutation in the ectodomain of KRM1 leads to severe ectodermal dysplasia including oligodontia. INTRO 19 22 Wnt protein_type Interestingly, the Wnt antagonistic activity of Krm is context dependent, and Krm proteins are actually dual-mode Wnt regulators. INTRO 48 51 Krm protein_type Interestingly, the Wnt antagonistic activity of Krm is context dependent, and Krm proteins are actually dual-mode Wnt regulators. INTRO 78 81 Krm protein_type Interestingly, the Wnt antagonistic activity of Krm is context dependent, and Krm proteins are actually dual-mode Wnt regulators. INTRO 114 117 Wnt protein_type Interestingly, the Wnt antagonistic activity of Krm is context dependent, and Krm proteins are actually dual-mode Wnt regulators. INTRO 7 17 absence of protein_state In the absence of Dkk, Krm1 and 2 change their function from inhibition to enhancement of Lrp6-mediated signaling. INTRO 18 21 Dkk protein_type In the absence of Dkk, Krm1 and 2 change their function from inhibition to enhancement of Lrp6-mediated signaling. INTRO 23 27 Krm1 protein_type In the absence of Dkk, Krm1 and 2 change their function from inhibition to enhancement of Lrp6-mediated signaling. INTRO 32 33 2 protein_type In the absence of Dkk, Krm1 and 2 change their function from inhibition to enhancement of Lrp6-mediated signaling. INTRO 90 94 Lrp6 protein_type In the absence of Dkk, Krm1 and 2 change their function from inhibition to enhancement of Lrp6-mediated signaling. INTRO 21 25 Lrp6 protein_type By direct binding to Lrp6 via the ectodomains, Krm proteins promote Lrp6 cell-surface localization and hence increase receptor availability. INTRO 34 45 ectodomains structure_element By direct binding to Lrp6 via the ectodomains, Krm proteins promote Lrp6 cell-surface localization and hence increase receptor availability. INTRO 47 50 Krm protein_type By direct binding to Lrp6 via the ectodomains, Krm proteins promote Lrp6 cell-surface localization and hence increase receptor availability. INTRO 68 72 Lrp6 protein_type By direct binding to Lrp6 via the ectodomains, Krm proteins promote Lrp6 cell-surface localization and hence increase receptor availability. INTRO 37 40 Krm protein_type Further increasing the complexity of Krm functionality, it was recently found that Krm1 (but not Krm2) can also act independently of LRP5/6 and Wnt as a dependence receptor, triggering apoptosis unless bound to Dkk. INTRO 83 87 Krm1 protein_type Further increasing the complexity of Krm functionality, it was recently found that Krm1 (but not Krm2) can also act independently of LRP5/6 and Wnt as a dependence receptor, triggering apoptosis unless bound to Dkk. INTRO 97 101 Krm2 protein_type Further increasing the complexity of Krm functionality, it was recently found that Krm1 (but not Krm2) can also act independently of LRP5/6 and Wnt as a dependence receptor, triggering apoptosis unless bound to Dkk. INTRO 133 139 LRP5/6 protein Further increasing the complexity of Krm functionality, it was recently found that Krm1 (but not Krm2) can also act independently of LRP5/6 and Wnt as a dependence receptor, triggering apoptosis unless bound to Dkk. INTRO 144 147 Wnt protein_type Further increasing the complexity of Krm functionality, it was recently found that Krm1 (but not Krm2) can also act independently of LRP5/6 and Wnt as a dependence receptor, triggering apoptosis unless bound to Dkk. INTRO 202 210 bound to protein_state Further increasing the complexity of Krm functionality, it was recently found that Krm1 (but not Krm2) can also act independently of LRP5/6 and Wnt as a dependence receptor, triggering apoptosis unless bound to Dkk. INTRO 211 214 Dkk protein_type Further increasing the complexity of Krm functionality, it was recently found that Krm1 (but not Krm2) can also act independently of LRP5/6 and Wnt as a dependence receptor, triggering apoptosis unless bound to Dkk. INTRO 14 18 Krm1 protein_type Structurally, Krm1 and 2 are type I transmembrane proteins with a 40 kDa ectodomain and a flexible cytoplasmic tail consisting of 60–75 residues. INTRO 23 24 2 protein_type Structurally, Krm1 and 2 are type I transmembrane proteins with a 40 kDa ectodomain and a flexible cytoplasmic tail consisting of 60–75 residues. INTRO 29 58 type I transmembrane proteins protein_type Structurally, Krm1 and 2 are type I transmembrane proteins with a 40 kDa ectodomain and a flexible cytoplasmic tail consisting of 60–75 residues. INTRO 73 83 ectodomain structure_element Structurally, Krm1 and 2 are type I transmembrane proteins with a 40 kDa ectodomain and a flexible cytoplasmic tail consisting of 60–75 residues. INTRO 90 98 flexible protein_state Structurally, Krm1 and 2 are type I transmembrane proteins with a 40 kDa ectodomain and a flexible cytoplasmic tail consisting of 60–75 residues. INTRO 99 115 cytoplasmic tail structure_element Structurally, Krm1 and 2 are type I transmembrane proteins with a 40 kDa ectodomain and a flexible cytoplasmic tail consisting of 60–75 residues. INTRO 130 132 60 residue_range Structurally, Krm1 and 2 are type I transmembrane proteins with a 40 kDa ectodomain and a flexible cytoplasmic tail consisting of 60–75 residues. INTRO 133 135 75 residue_range Structurally, Krm1 and 2 are type I transmembrane proteins with a 40 kDa ectodomain and a flexible cytoplasmic tail consisting of 60–75 residues. INTRO 4 14 ectodomain structure_element The ectodomain consists of three similarly sized structural domains of around 10 kDa each: the N-terminal Kringle domain (KR) is followed by a WSC domain of unknown fold. INTRO 106 113 Kringle structure_element The ectodomain consists of three similarly sized structural domains of around 10 kDa each: the N-terminal Kringle domain (KR) is followed by a WSC domain of unknown fold. INTRO 122 124 KR structure_element The ectodomain consists of three similarly sized structural domains of around 10 kDa each: the N-terminal Kringle domain (KR) is followed by a WSC domain of unknown fold. INTRO 143 146 WSC structure_element The ectodomain consists of three similarly sized structural domains of around 10 kDa each: the N-terminal Kringle domain (KR) is followed by a WSC domain of unknown fold. INTRO 33 36 CUB structure_element The third structural domain is a CUB domain. INTRO 3 27 approximately 70-residue residue_range An approximately 70-residue linker connects the CUB domain to the transmembrane span. INTRO 28 34 linker structure_element An approximately 70-residue linker connects the CUB domain to the transmembrane span. INTRO 48 51 CUB structure_element An approximately 70-residue linker connects the CUB domain to the transmembrane span. INTRO 66 84 transmembrane span structure_element An approximately 70-residue linker connects the CUB domain to the transmembrane span. INTRO 3 9 intact protein_state An intact KR-WSC-CUB domain triplet and membrane attachment is required for Wnt antagonism. INTRO 10 20 KR-WSC-CUB structure_element An intact KR-WSC-CUB domain triplet and membrane attachment is required for Wnt antagonism. INTRO 76 79 Wnt protein_type An intact KR-WSC-CUB domain triplet and membrane attachment is required for Wnt antagonism. INTRO 4 22 transmembrane span structure_element The transmembrane span and cytoplasmic tail can be replaced with a GPI linker without impact on Wnt antagonism. INTRO 27 43 cytoplasmic tail structure_element The transmembrane span and cytoplasmic tail can be replaced with a GPI linker without impact on Wnt antagonism. INTRO 67 70 GPI structure_element The transmembrane span and cytoplasmic tail can be replaced with a GPI linker without impact on Wnt antagonism. INTRO 71 77 linker structure_element The transmembrane span and cytoplasmic tail can be replaced with a GPI linker without impact on Wnt antagonism. INTRO 96 99 Wnt protein_type The transmembrane span and cytoplasmic tail can be replaced with a GPI linker without impact on Wnt antagonism. INTRO 4 14 structures evidence The structures presented here reveal the unknown fold of the WSC domain and the tight interactions of all three domains. INTRO 61 64 WSC structure_element The structures presented here reveal the unknown fold of the WSC domain and the tight interactions of all three domains. INTRO 58 85 LRP6PE3PE4-DKK1CRD2-KRM1ECD complex_assembly We further succeeded in determination of a low-resolution LRP6PE3PE4-DKK1CRD2-KRM1ECD complex, defining the architecture of the Wnt inhibitory complex that leads to Lrp6 cell-surface depletion. INTRO 128 131 Wnt protein_type We further succeeded in determination of a low-resolution LRP6PE3PE4-DKK1CRD2-KRM1ECD complex, defining the architecture of the Wnt inhibitory complex that leads to Lrp6 cell-surface depletion. INTRO 132 150 inhibitory complex complex_assembly We further succeeded in determination of a low-resolution LRP6PE3PE4-DKK1CRD2-KRM1ECD complex, defining the architecture of the Wnt inhibitory complex that leads to Lrp6 cell-surface depletion. INTRO 165 169 Lrp6 protein We further succeeded in determination of a low-resolution LRP6PE3PE4-DKK1CRD2-KRM1ECD complex, defining the architecture of the Wnt inhibitory complex that leads to Lrp6 cell-surface depletion. INTRO 34 54 extracellular domain structure_element The recombinant production of the extracellular domain of Krm for structural studies proved challenging (see Experimental Procedures). RESULTS 58 61 Krm protein_type The recombinant production of the extracellular domain of Krm for structural studies proved challenging (see Experimental Procedures). RESULTS 66 84 structural studies experimental_method The recombinant production of the extracellular domain of Krm for structural studies proved challenging (see Experimental Procedures). RESULTS 26 30 KRM1 protein We succeeded in purifying KRM1ECD complexes with DKK1fl, DKK1Linker-CRD2, and DKK1CRD2 that were monodisperse and stable in gel filtration, hence indicating at least micromolar affinity (data not shown). RESULTS 30 33 ECD structure_element We succeeded in purifying KRM1ECD complexes with DKK1fl, DKK1Linker-CRD2, and DKK1CRD2 that were monodisperse and stable in gel filtration, hence indicating at least micromolar affinity (data not shown). RESULTS 34 48 complexes with protein_state We succeeded in purifying KRM1ECD complexes with DKK1fl, DKK1Linker-CRD2, and DKK1CRD2 that were monodisperse and stable in gel filtration, hence indicating at least micromolar affinity (data not shown). RESULTS 49 55 DKK1fl protein We succeeded in purifying KRM1ECD complexes with DKK1fl, DKK1Linker-CRD2, and DKK1CRD2 that were monodisperse and stable in gel filtration, hence indicating at least micromolar affinity (data not shown). RESULTS 57 61 DKK1 protein We succeeded in purifying KRM1ECD complexes with DKK1fl, DKK1Linker-CRD2, and DKK1CRD2 that were monodisperse and stable in gel filtration, hence indicating at least micromolar affinity (data not shown). RESULTS 61 72 Linker-CRD2 structure_element We succeeded in purifying KRM1ECD complexes with DKK1fl, DKK1Linker-CRD2, and DKK1CRD2 that were monodisperse and stable in gel filtration, hence indicating at least micromolar affinity (data not shown). RESULTS 78 82 DKK1 protein We succeeded in purifying KRM1ECD complexes with DKK1fl, DKK1Linker-CRD2, and DKK1CRD2 that were monodisperse and stable in gel filtration, hence indicating at least micromolar affinity (data not shown). RESULTS 82 86 CRD2 structure_element We succeeded in purifying KRM1ECD complexes with DKK1fl, DKK1Linker-CRD2, and DKK1CRD2 that were monodisperse and stable in gel filtration, hence indicating at least micromolar affinity (data not shown). RESULTS 124 138 gel filtration experimental_method We succeeded in purifying KRM1ECD complexes with DKK1fl, DKK1Linker-CRD2, and DKK1CRD2 that were monodisperse and stable in gel filtration, hence indicating at least micromolar affinity (data not shown). RESULTS 8 21 crystal forms evidence Several crystal forms were obtained from these complexes, however, crystals always contained only KRM1 protein. RESULTS 67 75 crystals evidence Several crystal forms were obtained from these complexes, however, crystals always contained only KRM1 protein. RESULTS 98 102 KRM1 protein Several crystal forms were obtained from these complexes, however, crystals always contained only KRM1 protein. RESULTS 3 9 solved experimental_method We solved the structure of KRM1ECD in three crystal forms at 1.9, 2.8, and 3.2 Å resolution (Table 1). RESULTS 14 23 structure evidence We solved the structure of KRM1ECD in three crystal forms at 1.9, 2.8, and 3.2 Å resolution (Table 1). RESULTS 27 31 KRM1 protein We solved the structure of KRM1ECD in three crystal forms at 1.9, 2.8, and 3.2 Å resolution (Table 1). RESULTS 31 34 ECD structure_element We solved the structure of KRM1ECD in three crystal forms at 1.9, 2.8, and 3.2 Å resolution (Table 1). RESULTS 20 29 structure evidence The high-resolution structure is a near full-length model (Figure 1). RESULTS 40 51 full-length protein_state The high-resolution structure is a near full-length model (Figure 1). RESULTS 4 9 small protein_state The small, flexible, and charged 98AEHED102 loop could only be modeled in a slightly lower resolution structure and in crystal form III. RESULTS 11 19 flexible protein_state The small, flexible, and charged 98AEHED102 loop could only be modeled in a slightly lower resolution structure and in crystal form III. RESULTS 25 32 charged protein_state The small, flexible, and charged 98AEHED102 loop could only be modeled in a slightly lower resolution structure and in crystal form III. RESULTS 33 48 98AEHED102 loop structure_element The small, flexible, and charged 98AEHED102 loop could only be modeled in a slightly lower resolution structure and in crystal form III. RESULTS 102 111 structure evidence The small, flexible, and charged 98AEHED102 loop could only be modeled in a slightly lower resolution structure and in crystal form III. RESULTS 4 6 KR structure_element The KR, WSC, and CUB are arranged in a roughly triangular fashion with tight interactions between all three domains. RESULTS 8 11 WSC structure_element The KR, WSC, and CUB are arranged in a roughly triangular fashion with tight interactions between all three domains. RESULTS 17 20 CUB structure_element The KR, WSC, and CUB are arranged in a roughly triangular fashion with tight interactions between all three domains. RESULTS 4 6 KR structure_element The KR domain, which bears two of the four glycosylation sites, contains the canonical three disulfide bridges (C32-C114, C55-C95, C84-C109) and, like other Kringle domains, is low in secondary structure elements. RESULTS 43 62 glycosylation sites site The KR domain, which bears two of the four glycosylation sites, contains the canonical three disulfide bridges (C32-C114, C55-C95, C84-C109) and, like other Kringle domains, is low in secondary structure elements. RESULTS 93 110 disulfide bridges ptm The KR domain, which bears two of the four glycosylation sites, contains the canonical three disulfide bridges (C32-C114, C55-C95, C84-C109) and, like other Kringle domains, is low in secondary structure elements. RESULTS 112 115 C32 residue_name_number The KR domain, which bears two of the four glycosylation sites, contains the canonical three disulfide bridges (C32-C114, C55-C95, C84-C109) and, like other Kringle domains, is low in secondary structure elements. RESULTS 116 120 C114 residue_name_number The KR domain, which bears two of the four glycosylation sites, contains the canonical three disulfide bridges (C32-C114, C55-C95, C84-C109) and, like other Kringle domains, is low in secondary structure elements. RESULTS 122 125 C55 residue_name_number The KR domain, which bears two of the four glycosylation sites, contains the canonical three disulfide bridges (C32-C114, C55-C95, C84-C109) and, like other Kringle domains, is low in secondary structure elements. RESULTS 126 129 C95 residue_name_number The KR domain, which bears two of the four glycosylation sites, contains the canonical three disulfide bridges (C32-C114, C55-C95, C84-C109) and, like other Kringle domains, is low in secondary structure elements. RESULTS 131 134 C84 residue_name_number The KR domain, which bears two of the four glycosylation sites, contains the canonical three disulfide bridges (C32-C114, C55-C95, C84-C109) and, like other Kringle domains, is low in secondary structure elements. RESULTS 135 139 C109 residue_name_number The KR domain, which bears two of the four glycosylation sites, contains the canonical three disulfide bridges (C32-C114, C55-C95, C84-C109) and, like other Kringle domains, is low in secondary structure elements. RESULTS 157 164 Kringle structure_element The KR domain, which bears two of the four glycosylation sites, contains the canonical three disulfide bridges (C32-C114, C55-C95, C84-C109) and, like other Kringle domains, is low in secondary structure elements. RESULTS 30 37 Kringle structure_element The structurally most similar Kringle domain is that of human plasminogen (PDB: 1PKR) with an root-mean-square deviation (RMSD) of 1.7 Å for 73 aligned Cα (Figure 1B). RESULTS 56 61 human species The structurally most similar Kringle domain is that of human plasminogen (PDB: 1PKR) with an root-mean-square deviation (RMSD) of 1.7 Å for 73 aligned Cα (Figure 1B). RESULTS 62 73 plasminogen protein The structurally most similar Kringle domain is that of human plasminogen (PDB: 1PKR) with an root-mean-square deviation (RMSD) of 1.7 Å for 73 aligned Cα (Figure 1B). RESULTS 94 120 root-mean-square deviation evidence The structurally most similar Kringle domain is that of human plasminogen (PDB: 1PKR) with an root-mean-square deviation (RMSD) of 1.7 Å for 73 aligned Cα (Figure 1B). RESULTS 122 126 RMSD evidence The structurally most similar Kringle domain is that of human plasminogen (PDB: 1PKR) with an root-mean-square deviation (RMSD) of 1.7 Å for 73 aligned Cα (Figure 1B). RESULTS 4 8 KRM1 protein The KRM1 structure reveals the fold of the WSC domain for the first time. RESULTS 9 18 structure evidence The KRM1 structure reveals the fold of the WSC domain for the first time. RESULTS 43 46 WSC structure_element The KRM1 structure reveals the fold of the WSC domain for the first time. RESULTS 4 13 structure evidence The structure is best described as a sandwich of a β1-β5-β3-β4-β2 antiparallel β sheet and a single α helix. RESULTS 37 45 sandwich structure_element The structure is best described as a sandwich of a β1-β5-β3-β4-β2 antiparallel β sheet and a single α helix. RESULTS 51 86 β1-β5-β3-β4-β2 antiparallel β sheet structure_element The structure is best described as a sandwich of a β1-β5-β3-β4-β2 antiparallel β sheet and a single α helix. RESULTS 100 107 α helix structure_element The structure is best described as a sandwich of a β1-β5-β3-β4-β2 antiparallel β sheet and a single α helix. RESULTS 4 13 structure evidence The structure is also rich in loops and is stabilized by four disulfide bridges (C122-C186, C147-C167, C151-C169, C190-C198). RESULTS 30 35 loops structure_element The structure is also rich in loops and is stabilized by four disulfide bridges (C122-C186, C147-C167, C151-C169, C190-C198). RESULTS 62 79 disulfide bridges ptm The structure is also rich in loops and is stabilized by four disulfide bridges (C122-C186, C147-C167, C151-C169, C190-C198). RESULTS 81 85 C122 residue_name_number The structure is also rich in loops and is stabilized by four disulfide bridges (C122-C186, C147-C167, C151-C169, C190-C198). RESULTS 86 90 C186 residue_name_number The structure is also rich in loops and is stabilized by four disulfide bridges (C122-C186, C147-C167, C151-C169, C190-C198). RESULTS 92 96 C147 residue_name_number The structure is also rich in loops and is stabilized by four disulfide bridges (C122-C186, C147-C167, C151-C169, C190-C198). RESULTS 97 101 C167 residue_name_number The structure is also rich in loops and is stabilized by four disulfide bridges (C122-C186, C147-C167, C151-C169, C190-C198). RESULTS 103 107 C151 residue_name_number The structure is also rich in loops and is stabilized by four disulfide bridges (C122-C186, C147-C167, C151-C169, C190-C198). RESULTS 108 112 C169 residue_name_number The structure is also rich in loops and is stabilized by four disulfide bridges (C122-C186, C147-C167, C151-C169, C190-C198). RESULTS 114 118 C190 residue_name_number The structure is also rich in loops and is stabilized by four disulfide bridges (C122-C186, C147-C167, C151-C169, C190-C198). RESULTS 119 123 C198 residue_name_number The structure is also rich in loops and is stabilized by four disulfide bridges (C122-C186, C147-C167, C151-C169, C190-C198). RESULTS 10 25 PDBeFold server experimental_method Using the PDBeFold server, we detected a surprising yet significant homology to PAN module domains. RESULTS 80 98 PAN module domains structure_element Using the PDBeFold server, we detected a surprising yet significant homology to PAN module domains. RESULTS 35 59 hepatocyte growth factor protein_type The closest structural relative is hepatocyte growth factor (HGF, PDB: 1GP9), which superposes with an RMSD of 2.3 Å for 58 aligned Cα (Figure 1B). RESULTS 61 64 HGF protein_type The closest structural relative is hepatocyte growth factor (HGF, PDB: 1GP9), which superposes with an RMSD of 2.3 Å for 58 aligned Cα (Figure 1B). RESULTS 84 94 superposes experimental_method The closest structural relative is hepatocyte growth factor (HGF, PDB: 1GP9), which superposes with an RMSD of 2.3 Å for 58 aligned Cα (Figure 1B). RESULTS 103 107 RMSD evidence The closest structural relative is hepatocyte growth factor (HGF, PDB: 1GP9), which superposes with an RMSD of 2.3 Å for 58 aligned Cα (Figure 1B). RESULTS 4 7 CUB structure_element The CUB domain bears two glycosylation sites. RESULTS 25 44 glycosylation sites site The CUB domain bears two glycosylation sites. RESULTS 37 53 electron density evidence Although present, the quality of the electron density around N217 did not allow modeling of the sugar moiety. RESULTS 61 65 N217 residue_name_number Although present, the quality of the electron density around N217 did not allow modeling of the sugar moiety. RESULTS 3 17 crystal form I evidence In crystal form I, a calcium ion is present at the canonical position coordinated by the carboxylates of D263, D266 (bidentate), and D306, as well as the carbonyl of N309 and a water molecule. RESULTS 21 28 calcium chemical In crystal form I, a calcium ion is present at the canonical position coordinated by the carboxylates of D263, D266 (bidentate), and D306, as well as the carbonyl of N309 and a water molecule. RESULTS 70 84 coordinated by bond_interaction In crystal form I, a calcium ion is present at the canonical position coordinated by the carboxylates of D263, D266 (bidentate), and D306, as well as the carbonyl of N309 and a water molecule. RESULTS 105 109 D263 residue_name_number In crystal form I, a calcium ion is present at the canonical position coordinated by the carboxylates of D263, D266 (bidentate), and D306, as well as the carbonyl of N309 and a water molecule. RESULTS 111 115 D266 residue_name_number In crystal form I, a calcium ion is present at the canonical position coordinated by the carboxylates of D263, D266 (bidentate), and D306, as well as the carbonyl of N309 and a water molecule. RESULTS 133 137 D306 residue_name_number In crystal form I, a calcium ion is present at the canonical position coordinated by the carboxylates of D263, D266 (bidentate), and D306, as well as the carbonyl of N309 and a water molecule. RESULTS 166 170 N309 residue_name_number In crystal form I, a calcium ion is present at the canonical position coordinated by the carboxylates of D263, D266 (bidentate), and D306, as well as the carbonyl of N309 and a water molecule. RESULTS 177 182 water chemical In crystal form I, a calcium ion is present at the canonical position coordinated by the carboxylates of D263, D266 (bidentate), and D306, as well as the carbonyl of N309 and a water molecule. RESULTS 4 23 coordination sphere site The coordination sphere deviates significantly from perfectly octahedral (not shown). RESULTS 72 79 calcium chemical This might result in the site having a low affinity and may explain why calcium is not present in the two low-resolution crystal forms. RESULTS 121 134 crystal forms evidence This might result in the site having a low affinity and may explain why calcium is not present in the two low-resolution crystal forms. RESULTS 0 7 Loss of protein_state Loss of calcium has led to loop rearrangements and partial disorder in these crystal forms. RESULTS 8 15 calcium chemical Loss of calcium has led to loop rearrangements and partial disorder in these crystal forms. RESULTS 27 31 loop structure_element Loss of calcium has led to loop rearrangements and partial disorder in these crystal forms. RESULTS 77 90 crystal forms evidence Loss of calcium has led to loop rearrangements and partial disorder in these crystal forms. RESULTS 39 44 CUB_C structure_element The closest structural relative is the CUB_C domain of Tsg-6 (PDB: 2WNO), which superposes with KRMCUB with an RMSD of 1.6 Å for 104 Cα (Figure 1B). RESULTS 55 60 Tsg-6 protein The closest structural relative is the CUB_C domain of Tsg-6 (PDB: 2WNO), which superposes with KRMCUB with an RMSD of 1.6 Å for 104 Cα (Figure 1B). RESULTS 80 90 superposes experimental_method The closest structural relative is the CUB_C domain of Tsg-6 (PDB: 2WNO), which superposes with KRMCUB with an RMSD of 1.6 Å for 104 Cα (Figure 1B). RESULTS 96 99 KRM protein The closest structural relative is the CUB_C domain of Tsg-6 (PDB: 2WNO), which superposes with KRMCUB with an RMSD of 1.6 Å for 104 Cα (Figure 1B). RESULTS 99 102 CUB structure_element The closest structural relative is the CUB_C domain of Tsg-6 (PDB: 2WNO), which superposes with KRMCUB with an RMSD of 1.6 Å for 104 Cα (Figure 1B). RESULTS 111 115 RMSD evidence The closest structural relative is the CUB_C domain of Tsg-6 (PDB: 2WNO), which superposes with KRMCUB with an RMSD of 1.6 Å for 104 Cα (Figure 1B). RESULTS 2 15 superposition experimental_method A superposition of the three KRM1 structures reveals no major structural differences (Figure 1C) as anticipated from the plethora of interactions between the three domains. RESULTS 29 33 KRM1 protein A superposition of the three KRM1 structures reveals no major structural differences (Figure 1C) as anticipated from the plethora of interactions between the three domains. RESULTS 34 44 structures evidence A superposition of the three KRM1 structures reveals no major structural differences (Figure 1C) as anticipated from the plethora of interactions between the three domains. RESULTS 52 69 Ca2+ binding site site Minor differences are caused by the collapse of the Ca2+ binding site in crystal forms II and III and loop flexibility in the KR domain. RESULTS 73 97 crystal forms II and III evidence Minor differences are caused by the collapse of the Ca2+ binding site in crystal forms II and III and loop flexibility in the KR domain. RESULTS 102 106 loop structure_element Minor differences are caused by the collapse of the Ca2+ binding site in crystal forms II and III and loop flexibility in the KR domain. RESULTS 126 128 KR structure_element Minor differences are caused by the collapse of the Ca2+ binding site in crystal forms II and III and loop flexibility in the KR domain. RESULTS 4 9 F207S mutant The F207S mutation recently found to cause ectodermal dysplasia in Palestinian families maps to the hydrophobic core of the protein at the interface of the three subdomains (Figure 1A). RESULTS 100 116 hydrophobic core site The F207S mutation recently found to cause ectodermal dysplasia in Palestinian families maps to the hydrophobic core of the protein at the interface of the three subdomains (Figure 1A). RESULTS 139 148 interface site The F207S mutation recently found to cause ectodermal dysplasia in Palestinian families maps to the hydrophobic core of the protein at the interface of the three subdomains (Figure 1A). RESULTS 19 27 bound to protein_state Such a mutation is bound to severely destabilize the protein structure of KRM1, leading to disturbance of its Wnt antagonistic, Wnt stimulatory, and Wnt independent activity. RESULTS 74 78 KRM1 protein Such a mutation is bound to severely destabilize the protein structure of KRM1, leading to disturbance of its Wnt antagonistic, Wnt stimulatory, and Wnt independent activity. RESULTS 110 113 Wnt protein_type Such a mutation is bound to severely destabilize the protein structure of KRM1, leading to disturbance of its Wnt antagonistic, Wnt stimulatory, and Wnt independent activity. RESULTS 128 131 Wnt protein_type Such a mutation is bound to severely destabilize the protein structure of KRM1, leading to disturbance of its Wnt antagonistic, Wnt stimulatory, and Wnt independent activity. RESULTS 149 152 Wnt protein_type Such a mutation is bound to severely destabilize the protein structure of KRM1, leading to disturbance of its Wnt antagonistic, Wnt stimulatory, and Wnt independent activity. RESULTS 0 18 Co-crystallization experimental_method Co-crystallization of LRP6PE3PE4 with DKK1CRD2, and LRP6PE1 with an N-terminal peptide of DKK1 has provided valuable structural insight into direct Wnt inhibition by Dkk ligands. RESULTS 22 26 LRP6 protein Co-crystallization of LRP6PE3PE4 with DKK1CRD2, and LRP6PE1 with an N-terminal peptide of DKK1 has provided valuable structural insight into direct Wnt inhibition by Dkk ligands. RESULTS 26 32 PE3PE4 structure_element Co-crystallization of LRP6PE3PE4 with DKK1CRD2, and LRP6PE1 with an N-terminal peptide of DKK1 has provided valuable structural insight into direct Wnt inhibition by Dkk ligands. RESULTS 38 42 DKK1 protein Co-crystallization of LRP6PE3PE4 with DKK1CRD2, and LRP6PE1 with an N-terminal peptide of DKK1 has provided valuable structural insight into direct Wnt inhibition by Dkk ligands. RESULTS 42 46 CRD2 structure_element Co-crystallization of LRP6PE3PE4 with DKK1CRD2, and LRP6PE1 with an N-terminal peptide of DKK1 has provided valuable structural insight into direct Wnt inhibition by Dkk ligands. RESULTS 52 56 LRP6 protein Co-crystallization of LRP6PE3PE4 with DKK1CRD2, and LRP6PE1 with an N-terminal peptide of DKK1 has provided valuable structural insight into direct Wnt inhibition by Dkk ligands. RESULTS 56 59 PE1 structure_element Co-crystallization of LRP6PE3PE4 with DKK1CRD2, and LRP6PE1 with an N-terminal peptide of DKK1 has provided valuable structural insight into direct Wnt inhibition by Dkk ligands. RESULTS 90 94 DKK1 protein Co-crystallization of LRP6PE3PE4 with DKK1CRD2, and LRP6PE1 with an N-terminal peptide of DKK1 has provided valuable structural insight into direct Wnt inhibition by Dkk ligands. RESULTS 148 151 Wnt protein_type Co-crystallization of LRP6PE3PE4 with DKK1CRD2, and LRP6PE1 with an N-terminal peptide of DKK1 has provided valuable structural insight into direct Wnt inhibition by Dkk ligands. RESULTS 166 169 Dkk protein_type Co-crystallization of LRP6PE3PE4 with DKK1CRD2, and LRP6PE1 with an N-terminal peptide of DKK1 has provided valuable structural insight into direct Wnt inhibition by Dkk ligands. RESULTS 23 27 flat protein_state One face of the rather flat DKK1CRD2 fragment binds to the third β propeller of LRP6. RESULTS 28 32 DKK1 protein One face of the rather flat DKK1CRD2 fragment binds to the third β propeller of LRP6. RESULTS 32 36 CRD2 structure_element One face of the rather flat DKK1CRD2 fragment binds to the third β propeller of LRP6. RESULTS 46 54 binds to protein_state One face of the rather flat DKK1CRD2 fragment binds to the third β propeller of LRP6. RESULTS 59 76 third β propeller structure_element One face of the rather flat DKK1CRD2 fragment binds to the third β propeller of LRP6. RESULTS 80 84 LRP6 protein One face of the rather flat DKK1CRD2 fragment binds to the third β propeller of LRP6. RESULTS 0 19 Mutational analyses experimental_method Mutational analyses further implied that the LRP6PE3-averted face of DKK1CRD2 bears the Krm binding site, hence suggesting how Dkk can recruit both receptors into a ternary complex. RESULTS 45 49 LRP6 protein Mutational analyses further implied that the LRP6PE3-averted face of DKK1CRD2 bears the Krm binding site, hence suggesting how Dkk can recruit both receptors into a ternary complex. RESULTS 49 52 PE3 structure_element Mutational analyses further implied that the LRP6PE3-averted face of DKK1CRD2 bears the Krm binding site, hence suggesting how Dkk can recruit both receptors into a ternary complex. RESULTS 69 73 DKK1 protein Mutational analyses further implied that the LRP6PE3-averted face of DKK1CRD2 bears the Krm binding site, hence suggesting how Dkk can recruit both receptors into a ternary complex. RESULTS 73 77 CRD2 structure_element Mutational analyses further implied that the LRP6PE3-averted face of DKK1CRD2 bears the Krm binding site, hence suggesting how Dkk can recruit both receptors into a ternary complex. RESULTS 88 104 Krm binding site site Mutational analyses further implied that the LRP6PE3-averted face of DKK1CRD2 bears the Krm binding site, hence suggesting how Dkk can recruit both receptors into a ternary complex. RESULTS 127 130 Dkk protein_type Mutational analyses further implied that the LRP6PE3-averted face of DKK1CRD2 bears the Krm binding site, hence suggesting how Dkk can recruit both receptors into a ternary complex. RESULTS 148 157 receptors protein_type Mutational analyses further implied that the LRP6PE3-averted face of DKK1CRD2 bears the Krm binding site, hence suggesting how Dkk can recruit both receptors into a ternary complex. RESULTS 59 65 Lrp5/6 protein_type To obtain direct insight into ternary complex formation by Lrp5/6, Dkk, and Krm, we subjected an LRP6PE3PE4-DKK1fl-KRM1ECD complex to crystallization trials. RESULTS 67 70 Dkk protein_type To obtain direct insight into ternary complex formation by Lrp5/6, Dkk, and Krm, we subjected an LRP6PE3PE4-DKK1fl-KRM1ECD complex to crystallization trials. RESULTS 76 79 Krm protein_type To obtain direct insight into ternary complex formation by Lrp5/6, Dkk, and Krm, we subjected an LRP6PE3PE4-DKK1fl-KRM1ECD complex to crystallization trials. RESULTS 97 122 LRP6PE3PE4-DKK1fl-KRM1ECD complex_assembly To obtain direct insight into ternary complex formation by Lrp5/6, Dkk, and Krm, we subjected an LRP6PE3PE4-DKK1fl-KRM1ECD complex to crystallization trials. RESULTS 134 156 crystallization trials experimental_method To obtain direct insight into ternary complex formation by Lrp5/6, Dkk, and Krm, we subjected an LRP6PE3PE4-DKK1fl-KRM1ECD complex to crystallization trials. RESULTS 0 16 Diffraction data evidence Diffraction data collected from the resulting crystals were highly anisotropic with diffraction extending in the best directions to 3.5 Å and 3.7 Å but only to 6.4 Å in the third direction. RESULTS 46 54 crystals evidence Diffraction data collected from the resulting crystals were highly anisotropic with diffraction extending in the best directions to 3.5 Å and 3.7 Å but only to 6.4 Å in the third direction. RESULTS 36 47 diffraction evidence Despite the lack of high-resolution diffraction, the general architecture of the ternary complex is revealed (Figure 2A). RESULTS 0 4 DKK1 protein DKK1CRD2 binds to the top face of the LRP6 PE3 β propeller as described earlier for the binary complex. RESULTS 4 8 CRD2 structure_element DKK1CRD2 binds to the top face of the LRP6 PE3 β propeller as described earlier for the binary complex. RESULTS 9 17 binds to protein_state DKK1CRD2 binds to the top face of the LRP6 PE3 β propeller as described earlier for the binary complex. RESULTS 38 42 LRP6 protein DKK1CRD2 binds to the top face of the LRP6 PE3 β propeller as described earlier for the binary complex. RESULTS 43 46 PE3 structure_element DKK1CRD2 binds to the top face of the LRP6 PE3 β propeller as described earlier for the binary complex. RESULTS 47 58 β propeller structure_element DKK1CRD2 binds to the top face of the LRP6 PE3 β propeller as described earlier for the binary complex. RESULTS 0 4 KRM1 protein KRM1ECD does indeed bind on the opposite side of DKK1CRD2 with only its KR and WSC domains engaged in binding (Figure 2A). RESULTS 4 7 ECD structure_element KRM1ECD does indeed bind on the opposite side of DKK1CRD2 with only its KR and WSC domains engaged in binding (Figure 2A). RESULTS 20 27 bind on protein_state KRM1ECD does indeed bind on the opposite side of DKK1CRD2 with only its KR and WSC domains engaged in binding (Figure 2A). RESULTS 49 53 DKK1 protein KRM1ECD does indeed bind on the opposite side of DKK1CRD2 with only its KR and WSC domains engaged in binding (Figure 2A). RESULTS 53 57 CRD2 structure_element KRM1ECD does indeed bind on the opposite side of DKK1CRD2 with only its KR and WSC domains engaged in binding (Figure 2A). RESULTS 72 74 KR structure_element KRM1ECD does indeed bind on the opposite side of DKK1CRD2 with only its KR and WSC domains engaged in binding (Figure 2A). RESULTS 79 82 WSC structure_element KRM1ECD does indeed bind on the opposite side of DKK1CRD2 with only its KR and WSC domains engaged in binding (Figure 2A). RESULTS 45 60 crystallization experimental_method Although present in the complex subjected to crystallization, we observe no density that could correspond to CRD1 or the domain linker (L). RESULTS 76 83 density evidence Although present in the complex subjected to crystallization, we observe no density that could correspond to CRD1 or the domain linker (L). RESULTS 109 113 CRD1 structure_element Although present in the complex subjected to crystallization, we observe no density that could correspond to CRD1 or the domain linker (L). RESULTS 121 134 domain linker structure_element Although present in the complex subjected to crystallization, we observe no density that could correspond to CRD1 or the domain linker (L). RESULTS 136 137 L structure_element Although present in the complex subjected to crystallization, we observe no density that could correspond to CRD1 or the domain linker (L). RESULTS 20 24 CRD2 structure_element We confirm that the CRD2 of DKK1 is required and sufficient for binding to KRM1: In surface plasmon resonance (SPR), we measured low micromolar affinity between full-length DKK1 and immobilized KRM1ECD (Figure 2B). RESULTS 28 32 DKK1 protein We confirm that the CRD2 of DKK1 is required and sufficient for binding to KRM1: In surface plasmon resonance (SPR), we measured low micromolar affinity between full-length DKK1 and immobilized KRM1ECD (Figure 2B). RESULTS 75 79 KRM1 protein We confirm that the CRD2 of DKK1 is required and sufficient for binding to KRM1: In surface plasmon resonance (SPR), we measured low micromolar affinity between full-length DKK1 and immobilized KRM1ECD (Figure 2B). RESULTS 84 109 surface plasmon resonance experimental_method We confirm that the CRD2 of DKK1 is required and sufficient for binding to KRM1: In surface plasmon resonance (SPR), we measured low micromolar affinity between full-length DKK1 and immobilized KRM1ECD (Figure 2B). RESULTS 111 114 SPR experimental_method We confirm that the CRD2 of DKK1 is required and sufficient for binding to KRM1: In surface plasmon resonance (SPR), we measured low micromolar affinity between full-length DKK1 and immobilized KRM1ECD (Figure 2B). RESULTS 144 152 affinity evidence We confirm that the CRD2 of DKK1 is required and sufficient for binding to KRM1: In surface plasmon resonance (SPR), we measured low micromolar affinity between full-length DKK1 and immobilized KRM1ECD (Figure 2B). RESULTS 161 172 full-length protein_state We confirm that the CRD2 of DKK1 is required and sufficient for binding to KRM1: In surface plasmon resonance (SPR), we measured low micromolar affinity between full-length DKK1 and immobilized KRM1ECD (Figure 2B). RESULTS 173 177 DKK1 protein We confirm that the CRD2 of DKK1 is required and sufficient for binding to KRM1: In surface plasmon resonance (SPR), we measured low micromolar affinity between full-length DKK1 and immobilized KRM1ECD (Figure 2B). RESULTS 194 198 KRM1 protein We confirm that the CRD2 of DKK1 is required and sufficient for binding to KRM1: In surface plasmon resonance (SPR), we measured low micromolar affinity between full-length DKK1 and immobilized KRM1ECD (Figure 2B). RESULTS 198 201 ECD structure_element We confirm that the CRD2 of DKK1 is required and sufficient for binding to KRM1: In surface plasmon resonance (SPR), we measured low micromolar affinity between full-length DKK1 and immobilized KRM1ECD (Figure 2B). RESULTS 2 13 SUMO fusion experimental_method A SUMO fusion of DKK1L-CRD2 displayed a similar (slightly higher) affinity. RESULTS 17 27 DKK1L-CRD2 structure_element A SUMO fusion of DKK1L-CRD2 displayed a similar (slightly higher) affinity. RESULTS 66 74 affinity evidence A SUMO fusion of DKK1L-CRD2 displayed a similar (slightly higher) affinity. RESULTS 15 26 SUMO fusion experimental_method In contrast, a SUMO fusion of DKK1CRD1-L did not display binding for concentrations tested up to 325 μM (Figure 2B). RESULTS 30 40 DKK1CRD1-L structure_element In contrast, a SUMO fusion of DKK1CRD1-L did not display binding for concentrations tested up to 325 μM (Figure 2B). RESULTS 13 32 DKK1-KRM1 interface site Overall, the DKK1-KRM1 interface is characterized by a large number of polar interactions but only few hydrophobic contacts (Figure 2C). RESULTS 71 89 polar interactions bond_interaction Overall, the DKK1-KRM1 interface is characterized by a large number of polar interactions but only few hydrophobic contacts (Figure 2C). RESULTS 103 123 hydrophobic contacts bond_interaction Overall, the DKK1-KRM1 interface is characterized by a large number of polar interactions but only few hydrophobic contacts (Figure 2C). RESULTS 4 21 crystal structure evidence The crystal structure gives an explanation for DKK1 loss-of-binding mutations identified previously: R191 of DKK1 forms a double salt bridge to D125 and E162 of KRM1 (Figure 2C). RESULTS 47 51 DKK1 protein The crystal structure gives an explanation for DKK1 loss-of-binding mutations identified previously: R191 of DKK1 forms a double salt bridge to D125 and E162 of KRM1 (Figure 2C). RESULTS 101 105 R191 residue_name_number The crystal structure gives an explanation for DKK1 loss-of-binding mutations identified previously: R191 of DKK1 forms a double salt bridge to D125 and E162 of KRM1 (Figure 2C). RESULTS 109 113 DKK1 protein The crystal structure gives an explanation for DKK1 loss-of-binding mutations identified previously: R191 of DKK1 forms a double salt bridge to D125 and E162 of KRM1 (Figure 2C). RESULTS 129 140 salt bridge bond_interaction The crystal structure gives an explanation for DKK1 loss-of-binding mutations identified previously: R191 of DKK1 forms a double salt bridge to D125 and E162 of KRM1 (Figure 2C). RESULTS 144 148 D125 residue_name_number The crystal structure gives an explanation for DKK1 loss-of-binding mutations identified previously: R191 of DKK1 forms a double salt bridge to D125 and E162 of KRM1 (Figure 2C). RESULTS 153 157 E162 residue_name_number The crystal structure gives an explanation for DKK1 loss-of-binding mutations identified previously: R191 of DKK1 forms a double salt bridge to D125 and E162 of KRM1 (Figure 2C). RESULTS 161 165 KRM1 protein The crystal structure gives an explanation for DKK1 loss-of-binding mutations identified previously: R191 of DKK1 forms a double salt bridge to D125 and E162 of KRM1 (Figure 2C). RESULTS 2 17 charge reversal experimental_method A charge reversal as in the mouse Dkk1 (mDkk1) R197E variant would severely disrupt the binding. RESULTS 28 33 mouse taxonomy_domain A charge reversal as in the mouse Dkk1 (mDkk1) R197E variant would severely disrupt the binding. RESULTS 34 38 Dkk1 protein A charge reversal as in the mouse Dkk1 (mDkk1) R197E variant would severely disrupt the binding. RESULTS 40 45 mDkk1 protein A charge reversal as in the mouse Dkk1 (mDkk1) R197E variant would severely disrupt the binding. RESULTS 47 52 R197E mutant A charge reversal as in the mouse Dkk1 (mDkk1) R197E variant would severely disrupt the binding. RESULTS 15 19 K226 residue_name_number Similarly, the K226 side chain of DKK1, which points to a small hydrophobic pocket on the surface of KRM1 formed by Y108, W94, and W106, forms salt bridges with the side chains of KRM1 D88 and D90. RESULTS 34 38 DKK1 protein Similarly, the K226 side chain of DKK1, which points to a small hydrophobic pocket on the surface of KRM1 formed by Y108, W94, and W106, forms salt bridges with the side chains of KRM1 D88 and D90. RESULTS 64 82 hydrophobic pocket site Similarly, the K226 side chain of DKK1, which points to a small hydrophobic pocket on the surface of KRM1 formed by Y108, W94, and W106, forms salt bridges with the side chains of KRM1 D88 and D90. RESULTS 101 105 KRM1 protein Similarly, the K226 side chain of DKK1, which points to a small hydrophobic pocket on the surface of KRM1 formed by Y108, W94, and W106, forms salt bridges with the side chains of KRM1 D88 and D90. RESULTS 116 120 Y108 residue_name_number Similarly, the K226 side chain of DKK1, which points to a small hydrophobic pocket on the surface of KRM1 formed by Y108, W94, and W106, forms salt bridges with the side chains of KRM1 D88 and D90. RESULTS 122 125 W94 residue_name_number Similarly, the K226 side chain of DKK1, which points to a small hydrophobic pocket on the surface of KRM1 formed by Y108, W94, and W106, forms salt bridges with the side chains of KRM1 D88 and D90. RESULTS 131 135 W106 residue_name_number Similarly, the K226 side chain of DKK1, which points to a small hydrophobic pocket on the surface of KRM1 formed by Y108, W94, and W106, forms salt bridges with the side chains of KRM1 D88 and D90. RESULTS 143 155 salt bridges bond_interaction Similarly, the K226 side chain of DKK1, which points to a small hydrophobic pocket on the surface of KRM1 formed by Y108, W94, and W106, forms salt bridges with the side chains of KRM1 D88 and D90. RESULTS 180 184 KRM1 protein Similarly, the K226 side chain of DKK1, which points to a small hydrophobic pocket on the surface of KRM1 formed by Y108, W94, and W106, forms salt bridges with the side chains of KRM1 D88 and D90. RESULTS 185 188 D88 residue_name_number Similarly, the K226 side chain of DKK1, which points to a small hydrophobic pocket on the surface of KRM1 formed by Y108, W94, and W106, forms salt bridges with the side chains of KRM1 D88 and D90. RESULTS 193 196 D90 residue_name_number Similarly, the K226 side chain of DKK1, which points to a small hydrophobic pocket on the surface of KRM1 formed by Y108, W94, and W106, forms salt bridges with the side chains of KRM1 D88 and D90. RESULTS 9 24 charge reversal experimental_method Again, a charge reversal as shown before for mDkk1 K232E would be incompatible with binding. RESULTS 45 50 mDkk1 protein Again, a charge reversal as shown before for mDkk1 K232E would be incompatible with binding. RESULTS 51 56 K232E mutant Again, a charge reversal as shown before for mDkk1 K232E would be incompatible with binding. RESULTS 18 22 DKK1 protein The side chain of DKK1 S192 was also predicted to be involved in Krm binding. RESULTS 23 27 S192 residue_name_number The side chain of DKK1 S192 was also predicted to be involved in Krm binding. RESULTS 65 68 Krm protein_type The side chain of DKK1 S192 was also predicted to be involved in Krm binding. RESULTS 52 56 D201 residue_name_number Indeed, we found (Figure 2C) that the side chain of D201 of KRM1 forms two hydrogen bonds to the side-chain hydroxyl and the backbone amide of S192 (mouse, S198). RESULTS 60 64 KRM1 protein Indeed, we found (Figure 2C) that the side chain of D201 of KRM1 forms two hydrogen bonds to the side-chain hydroxyl and the backbone amide of S192 (mouse, S198). RESULTS 75 89 hydrogen bonds bond_interaction Indeed, we found (Figure 2C) that the side chain of D201 of KRM1 forms two hydrogen bonds to the side-chain hydroxyl and the backbone amide of S192 (mouse, S198). RESULTS 143 147 S192 residue_name_number Indeed, we found (Figure 2C) that the side chain of D201 of KRM1 forms two hydrogen bonds to the side-chain hydroxyl and the backbone amide of S192 (mouse, S198). RESULTS 149 154 mouse taxonomy_domain Indeed, we found (Figure 2C) that the side chain of D201 of KRM1 forms two hydrogen bonds to the side-chain hydroxyl and the backbone amide of S192 (mouse, S198). RESULTS 156 160 S198 residue_name_number Indeed, we found (Figure 2C) that the side chain of D201 of KRM1 forms two hydrogen bonds to the side-chain hydroxyl and the backbone amide of S192 (mouse, S198). RESULTS 11 29 polar interactions bond_interaction Additional polar interactions are formed between the N140, S163, and Y165 side chains of KRM1 and DKK1 backbone carbonyls of W206, L190, and C189, respectively. RESULTS 53 57 N140 residue_name_number Additional polar interactions are formed between the N140, S163, and Y165 side chains of KRM1 and DKK1 backbone carbonyls of W206, L190, and C189, respectively. RESULTS 59 63 S163 residue_name_number Additional polar interactions are formed between the N140, S163, and Y165 side chains of KRM1 and DKK1 backbone carbonyls of W206, L190, and C189, respectively. RESULTS 69 73 Y165 residue_name_number Additional polar interactions are formed between the N140, S163, and Y165 side chains of KRM1 and DKK1 backbone carbonyls of W206, L190, and C189, respectively. RESULTS 89 93 KRM1 protein Additional polar interactions are formed between the N140, S163, and Y165 side chains of KRM1 and DKK1 backbone carbonyls of W206, L190, and C189, respectively. RESULTS 98 102 DKK1 protein Additional polar interactions are formed between the N140, S163, and Y165 side chains of KRM1 and DKK1 backbone carbonyls of W206, L190, and C189, respectively. RESULTS 125 129 W206 residue_name_number Additional polar interactions are formed between the N140, S163, and Y165 side chains of KRM1 and DKK1 backbone carbonyls of W206, L190, and C189, respectively. RESULTS 131 135 L190 residue_name_number Additional polar interactions are formed between the N140, S163, and Y165 side chains of KRM1 and DKK1 backbone carbonyls of W206, L190, and C189, respectively. RESULTS 141 145 C189 residue_name_number Additional polar interactions are formed between the N140, S163, and Y165 side chains of KRM1 and DKK1 backbone carbonyls of W206, L190, and C189, respectively. RESULTS 16 20 DKK1 protein The carbonyl of DKK1 R224 is hydrogen bonded to Y105 and W106 of KRM1. RESULTS 21 25 R224 residue_name_number The carbonyl of DKK1 R224 is hydrogen bonded to Y105 and W106 of KRM1. RESULTS 29 44 hydrogen bonded bond_interaction The carbonyl of DKK1 R224 is hydrogen bonded to Y105 and W106 of KRM1. RESULTS 48 52 Y105 residue_name_number The carbonyl of DKK1 R224 is hydrogen bonded to Y105 and W106 of KRM1. RESULTS 57 61 W106 residue_name_number The carbonyl of DKK1 R224 is hydrogen bonded to Y105 and W106 of KRM1. RESULTS 65 69 KRM1 protein The carbonyl of DKK1 R224 is hydrogen bonded to Y105 and W106 of KRM1. RESULTS 20 23 Dkk protein_type We suspect that the Dkk charge reversal mutations performed in the murine background and shown to diminish Krm binding K211E and R203E (mouse K217E and R209E) do so likely indirectly by disruption of the Dkk fold. RESULTS 24 49 charge reversal mutations experimental_method We suspect that the Dkk charge reversal mutations performed in the murine background and shown to diminish Krm binding K211E and R203E (mouse K217E and R209E) do so likely indirectly by disruption of the Dkk fold. RESULTS 67 73 murine taxonomy_domain We suspect that the Dkk charge reversal mutations performed in the murine background and shown to diminish Krm binding K211E and R203E (mouse K217E and R209E) do so likely indirectly by disruption of the Dkk fold. RESULTS 107 110 Krm protein_type We suspect that the Dkk charge reversal mutations performed in the murine background and shown to diminish Krm binding K211E and R203E (mouse K217E and R209E) do so likely indirectly by disruption of the Dkk fold. RESULTS 119 124 K211E mutant We suspect that the Dkk charge reversal mutations performed in the murine background and shown to diminish Krm binding K211E and R203E (mouse K217E and R209E) do so likely indirectly by disruption of the Dkk fold. RESULTS 129 134 R203E mutant We suspect that the Dkk charge reversal mutations performed in the murine background and shown to diminish Krm binding K211E and R203E (mouse K217E and R209E) do so likely indirectly by disruption of the Dkk fold. RESULTS 136 141 mouse taxonomy_domain We suspect that the Dkk charge reversal mutations performed in the murine background and shown to diminish Krm binding K211E and R203E (mouse K217E and R209E) do so likely indirectly by disruption of the Dkk fold. RESULTS 142 147 K217E mutant We suspect that the Dkk charge reversal mutations performed in the murine background and shown to diminish Krm binding K211E and R203E (mouse K217E and R209E) do so likely indirectly by disruption of the Dkk fold. RESULTS 152 157 R209E mutant We suspect that the Dkk charge reversal mutations performed in the murine background and shown to diminish Krm binding K211E and R203E (mouse K217E and R209E) do so likely indirectly by disruption of the Dkk fold. RESULTS 204 207 Dkk protein_type We suspect that the Dkk charge reversal mutations performed in the murine background and shown to diminish Krm binding K211E and R203E (mouse K217E and R209E) do so likely indirectly by disruption of the Dkk fold. RESULTS 25 42 DKK1 binding site site We further validated the DKK1 binding site on KRM1 by introducing glycosylation sites at the KR (90DVS92→NVS) and WSC (189VCF191→NCS) domains pointing toward DKK (Figures 2A and 2D). RESULTS 46 50 KRM1 protein We further validated the DKK1 binding site on KRM1 by introducing glycosylation sites at the KR (90DVS92→NVS) and WSC (189VCF191→NCS) domains pointing toward DKK (Figures 2A and 2D). RESULTS 54 65 introducing experimental_method We further validated the DKK1 binding site on KRM1 by introducing glycosylation sites at the KR (90DVS92→NVS) and WSC (189VCF191→NCS) domains pointing toward DKK (Figures 2A and 2D). RESULTS 66 85 glycosylation sites site We further validated the DKK1 binding site on KRM1 by introducing glycosylation sites at the KR (90DVS92→NVS) and WSC (189VCF191→NCS) domains pointing toward DKK (Figures 2A and 2D). RESULTS 93 95 KR structure_element We further validated the DKK1 binding site on KRM1 by introducing glycosylation sites at the KR (90DVS92→NVS) and WSC (189VCF191→NCS) domains pointing toward DKK (Figures 2A and 2D). RESULTS 97 108 90DVS92→NVS mutant We further validated the DKK1 binding site on KRM1 by introducing glycosylation sites at the KR (90DVS92→NVS) and WSC (189VCF191→NCS) domains pointing toward DKK (Figures 2A and 2D). RESULTS 114 117 WSC structure_element We further validated the DKK1 binding site on KRM1 by introducing glycosylation sites at the KR (90DVS92→NVS) and WSC (189VCF191→NCS) domains pointing toward DKK (Figures 2A and 2D). RESULTS 119 132 189VCF191→NCS mutant We further validated the DKK1 binding site on KRM1 by introducing glycosylation sites at the KR (90DVS92→NVS) and WSC (189VCF191→NCS) domains pointing toward DKK (Figures 2A and 2D). RESULTS 158 161 DKK protein We further validated the DKK1 binding site on KRM1 by introducing glycosylation sites at the KR (90DVS92→NVS) and WSC (189VCF191→NCS) domains pointing toward DKK (Figures 2A and 2D). RESULTS 16 32 N-linked glycans ptm Introduction of N-linked glycans in protein-protein-binding sites is an established way of disrupting protein-binding interfaces. RESULTS 36 65 protein-protein-binding sites site Introduction of N-linked glycans in protein-protein-binding sites is an established way of disrupting protein-binding interfaces. RESULTS 102 128 protein-binding interfaces site Introduction of N-linked glycans in protein-protein-binding sites is an established way of disrupting protein-binding interfaces. RESULTS 5 15 ectodomain structure_element Both ectodomain mutants were secreted comparably with the wild-type, indicating correct folding, but failed to achieve any detectable binding in SPR using full-length DKK1 as analyte. RESULTS 16 23 mutants protein_state Both ectodomain mutants were secreted comparably with the wild-type, indicating correct folding, but failed to achieve any detectable binding in SPR using full-length DKK1 as analyte. RESULTS 58 67 wild-type protein_state Both ectodomain mutants were secreted comparably with the wild-type, indicating correct folding, but failed to achieve any detectable binding in SPR using full-length DKK1 as analyte. RESULTS 145 148 SPR experimental_method Both ectodomain mutants were secreted comparably with the wild-type, indicating correct folding, but failed to achieve any detectable binding in SPR using full-length DKK1 as analyte. RESULTS 155 166 full-length protein_state Both ectodomain mutants were secreted comparably with the wild-type, indicating correct folding, but failed to achieve any detectable binding in SPR using full-length DKK1 as analyte. RESULTS 167 171 DKK1 protein Both ectodomain mutants were secreted comparably with the wild-type, indicating correct folding, but failed to achieve any detectable binding in SPR using full-length DKK1 as analyte. RESULTS 15 21 mutant protein_state In contrast, a mutant carrying an additional N-glycan outside the interface at the CUB domain (309NQA311→NQS), was wild-type-like in DKK1 binding (Figure 2D). RESULTS 45 53 N-glycan ptm In contrast, a mutant carrying an additional N-glycan outside the interface at the CUB domain (309NQA311→NQS), was wild-type-like in DKK1 binding (Figure 2D). RESULTS 66 75 interface site In contrast, a mutant carrying an additional N-glycan outside the interface at the CUB domain (309NQA311→NQS), was wild-type-like in DKK1 binding (Figure 2D). RESULTS 83 86 CUB structure_element In contrast, a mutant carrying an additional N-glycan outside the interface at the CUB domain (309NQA311→NQS), was wild-type-like in DKK1 binding (Figure 2D). RESULTS 95 108 309NQA311→NQS mutant In contrast, a mutant carrying an additional N-glycan outside the interface at the CUB domain (309NQA311→NQS), was wild-type-like in DKK1 binding (Figure 2D). RESULTS 115 124 wild-type protein_state In contrast, a mutant carrying an additional N-glycan outside the interface at the CUB domain (309NQA311→NQS), was wild-type-like in DKK1 binding (Figure 2D). RESULTS 133 137 DKK1 protein In contrast, a mutant carrying an additional N-glycan outside the interface at the CUB domain (309NQA311→NQS), was wild-type-like in DKK1 binding (Figure 2D). RESULTS 27 49 LRP6-KRM1 Binding Site site Identification of a Direct LRP6-KRM1 Binding Site RESULTS 4 31 LRP6PE3PE4-DKK1CRD2-KRM1ECD complex_assembly The LRP6PE3PE4-DKK1CRD2-KRM1ECD complex structure reveals no direct interactions between KRM1 and LRP6. RESULTS 40 49 structure evidence The LRP6PE3PE4-DKK1CRD2-KRM1ECD complex structure reveals no direct interactions between KRM1 and LRP6. RESULTS 89 93 KRM1 protein The LRP6PE3PE4-DKK1CRD2-KRM1ECD complex structure reveals no direct interactions between KRM1 and LRP6. RESULTS 98 102 LRP6 protein The LRP6PE3PE4-DKK1CRD2-KRM1ECD complex structure reveals no direct interactions between KRM1 and LRP6. RESULTS 35 47 complex with protein_state We constructed in silico a ternary complex with a close to full-length LRP6 ectodomain (PE1PE2PE3PE4 horse shoe) similar to but without refinement against electron microscopy (EM) or small-angle X-ray scattering data. RESULTS 59 70 full-length protein_state We constructed in silico a ternary complex with a close to full-length LRP6 ectodomain (PE1PE2PE3PE4 horse shoe) similar to but without refinement against electron microscopy (EM) or small-angle X-ray scattering data. RESULTS 71 75 LRP6 protein We constructed in silico a ternary complex with a close to full-length LRP6 ectodomain (PE1PE2PE3PE4 horse shoe) similar to but without refinement against electron microscopy (EM) or small-angle X-ray scattering data. RESULTS 76 86 ectodomain structure_element We constructed in silico a ternary complex with a close to full-length LRP6 ectodomain (PE1PE2PE3PE4 horse shoe) similar to but without refinement against electron microscopy (EM) or small-angle X-ray scattering data. RESULTS 88 100 PE1PE2PE3PE4 structure_element We constructed in silico a ternary complex with a close to full-length LRP6 ectodomain (PE1PE2PE3PE4 horse shoe) similar to but without refinement against electron microscopy (EM) or small-angle X-ray scattering data. RESULTS 101 111 horse shoe structure_element We constructed in silico a ternary complex with a close to full-length LRP6 ectodomain (PE1PE2PE3PE4 horse shoe) similar to but without refinement against electron microscopy (EM) or small-angle X-ray scattering data. RESULTS 155 174 electron microscopy experimental_method We constructed in silico a ternary complex with a close to full-length LRP6 ectodomain (PE1PE2PE3PE4 horse shoe) similar to but without refinement against electron microscopy (EM) or small-angle X-ray scattering data. RESULTS 176 178 EM experimental_method We constructed in silico a ternary complex with a close to full-length LRP6 ectodomain (PE1PE2PE3PE4 horse shoe) similar to but without refinement against electron microscopy (EM) or small-angle X-ray scattering data. RESULTS 183 211 small-angle X-ray scattering experimental_method We constructed in silico a ternary complex with a close to full-length LRP6 ectodomain (PE1PE2PE3PE4 horse shoe) similar to but without refinement against electron microscopy (EM) or small-angle X-ray scattering data. RESULTS 13 19 PE3PE4 structure_element An auxiliary PE3PE4 fragment was superimposed via PE4 onto PE3 of the crystal structure, and the LRP6PE1PE2 structure was superimposed via PE2 onto PE3 of this auxiliary fragment (Figure 3A). RESULTS 33 45 superimposed experimental_method An auxiliary PE3PE4 fragment was superimposed via PE4 onto PE3 of the crystal structure, and the LRP6PE1PE2 structure was superimposed via PE2 onto PE3 of this auxiliary fragment (Figure 3A). RESULTS 50 53 PE4 structure_element An auxiliary PE3PE4 fragment was superimposed via PE4 onto PE3 of the crystal structure, and the LRP6PE1PE2 structure was superimposed via PE2 onto PE3 of this auxiliary fragment (Figure 3A). RESULTS 59 62 PE3 structure_element An auxiliary PE3PE4 fragment was superimposed via PE4 onto PE3 of the crystal structure, and the LRP6PE1PE2 structure was superimposed via PE2 onto PE3 of this auxiliary fragment (Figure 3A). RESULTS 70 87 crystal structure evidence An auxiliary PE3PE4 fragment was superimposed via PE4 onto PE3 of the crystal structure, and the LRP6PE1PE2 structure was superimposed via PE2 onto PE3 of this auxiliary fragment (Figure 3A). RESULTS 97 101 LRP6 protein An auxiliary PE3PE4 fragment was superimposed via PE4 onto PE3 of the crystal structure, and the LRP6PE1PE2 structure was superimposed via PE2 onto PE3 of this auxiliary fragment (Figure 3A). RESULTS 101 107 PE1PE2 structure_element An auxiliary PE3PE4 fragment was superimposed via PE4 onto PE3 of the crystal structure, and the LRP6PE1PE2 structure was superimposed via PE2 onto PE3 of this auxiliary fragment (Figure 3A). RESULTS 108 117 structure evidence An auxiliary PE3PE4 fragment was superimposed via PE4 onto PE3 of the crystal structure, and the LRP6PE1PE2 structure was superimposed via PE2 onto PE3 of this auxiliary fragment (Figure 3A). RESULTS 122 134 superimposed experimental_method An auxiliary PE3PE4 fragment was superimposed via PE4 onto PE3 of the crystal structure, and the LRP6PE1PE2 structure was superimposed via PE2 onto PE3 of this auxiliary fragment (Figure 3A). RESULTS 139 142 PE2 structure_element An auxiliary PE3PE4 fragment was superimposed via PE4 onto PE3 of the crystal structure, and the LRP6PE1PE2 structure was superimposed via PE2 onto PE3 of this auxiliary fragment (Figure 3A). RESULTS 148 151 PE3 structure_element An auxiliary PE3PE4 fragment was superimposed via PE4 onto PE3 of the crystal structure, and the LRP6PE1PE2 structure was superimposed via PE2 onto PE3 of this auxiliary fragment (Figure 3A). RESULTS 98 117 Ca2+-binding region site For this crude approximation of a true ternary complex, we noted very close proximity between the Ca2+-binding region of KRM1 and the top face of the PE2 β propeller of LRP6. RESULTS 121 125 KRM1 protein For this crude approximation of a true ternary complex, we noted very close proximity between the Ca2+-binding region of KRM1 and the top face of the PE2 β propeller of LRP6. RESULTS 150 153 PE2 structure_element For this crude approximation of a true ternary complex, we noted very close proximity between the Ca2+-binding region of KRM1 and the top face of the PE2 β propeller of LRP6. RESULTS 154 165 β propeller structure_element For this crude approximation of a true ternary complex, we noted very close proximity between the Ca2+-binding region of KRM1 and the top face of the PE2 β propeller of LRP6. RESULTS 169 173 LRP6 protein For this crude approximation of a true ternary complex, we noted very close proximity between the Ca2+-binding region of KRM1 and the top face of the PE2 β propeller of LRP6. RESULTS 4 19 solvent-exposed protein_state The solvent-exposed residues R307, I308, and N309 of the central Ca2+-binding β connection loop of KRM1 would be almost ideally positioned for binding to this face, which is commonly used as a binding site on β propellers. RESULTS 29 33 R307 residue_name_number The solvent-exposed residues R307, I308, and N309 of the central Ca2+-binding β connection loop of KRM1 would be almost ideally positioned for binding to this face, which is commonly used as a binding site on β propellers. RESULTS 35 39 I308 residue_name_number The solvent-exposed residues R307, I308, and N309 of the central Ca2+-binding β connection loop of KRM1 would be almost ideally positioned for binding to this face, which is commonly used as a binding site on β propellers. RESULTS 45 49 N309 residue_name_number The solvent-exposed residues R307, I308, and N309 of the central Ca2+-binding β connection loop of KRM1 would be almost ideally positioned for binding to this face, which is commonly used as a binding site on β propellers. RESULTS 65 95 Ca2+-binding β connection loop structure_element The solvent-exposed residues R307, I308, and N309 of the central Ca2+-binding β connection loop of KRM1 would be almost ideally positioned for binding to this face, which is commonly used as a binding site on β propellers. RESULTS 99 103 KRM1 protein The solvent-exposed residues R307, I308, and N309 of the central Ca2+-binding β connection loop of KRM1 would be almost ideally positioned for binding to this face, which is commonly used as a binding site on β propellers. RESULTS 193 205 binding site site The solvent-exposed residues R307, I308, and N309 of the central Ca2+-binding β connection loop of KRM1 would be almost ideally positioned for binding to this face, which is commonly used as a binding site on β propellers. RESULTS 209 221 β propellers structure_element The solvent-exposed residues R307, I308, and N309 of the central Ca2+-binding β connection loop of KRM1 would be almost ideally positioned for binding to this face, which is commonly used as a binding site on β propellers. RESULTS 20 28 arginine residue_name Peptides containing arginine/lysine, isoleucine, and asparagine (consensus sequence N-X-I-(G)-R/K) are also employed by DKK1 and SOST to bind to LRP6 (albeit to propeller 1; Figure 3B). RESULTS 29 35 lysine residue_name Peptides containing arginine/lysine, isoleucine, and asparagine (consensus sequence N-X-I-(G)-R/K) are also employed by DKK1 and SOST to bind to LRP6 (albeit to propeller 1; Figure 3B). RESULTS 37 47 isoleucine residue_name Peptides containing arginine/lysine, isoleucine, and asparagine (consensus sequence N-X-I-(G)-R/K) are also employed by DKK1 and SOST to bind to LRP6 (albeit to propeller 1; Figure 3B). RESULTS 53 63 asparagine residue_name Peptides containing arginine/lysine, isoleucine, and asparagine (consensus sequence N-X-I-(G)-R/K) are also employed by DKK1 and SOST to bind to LRP6 (albeit to propeller 1; Figure 3B). RESULTS 84 97 N-X-I-(G)-R/K structure_element Peptides containing arginine/lysine, isoleucine, and asparagine (consensus sequence N-X-I-(G)-R/K) are also employed by DKK1 and SOST to bind to LRP6 (albeit to propeller 1; Figure 3B). RESULTS 120 124 DKK1 protein Peptides containing arginine/lysine, isoleucine, and asparagine (consensus sequence N-X-I-(G)-R/K) are also employed by DKK1 and SOST to bind to LRP6 (albeit to propeller 1; Figure 3B). RESULTS 129 133 SOST protein Peptides containing arginine/lysine, isoleucine, and asparagine (consensus sequence N-X-I-(G)-R/K) are also employed by DKK1 and SOST to bind to LRP6 (albeit to propeller 1; Figure 3B). RESULTS 145 149 LRP6 protein Peptides containing arginine/lysine, isoleucine, and asparagine (consensus sequence N-X-I-(G)-R/K) are also employed by DKK1 and SOST to bind to LRP6 (albeit to propeller 1; Figure 3B). RESULTS 161 172 propeller 1 structure_element Peptides containing arginine/lysine, isoleucine, and asparagine (consensus sequence N-X-I-(G)-R/K) are also employed by DKK1 and SOST to bind to LRP6 (albeit to propeller 1; Figure 3B). RESULTS 31 35 KRM1 protein To support the hypothesis that KRM1CUB binds to LRP6PE2, we used SPR and compared binding of the wild-type and the GlycoCUB mutant of KRM1ECD (bearing an N-glycosylation site at N309) with a purified LRP6PE1PE2 fragment. RESULTS 35 38 CUB structure_element To support the hypothesis that KRM1CUB binds to LRP6PE2, we used SPR and compared binding of the wild-type and the GlycoCUB mutant of KRM1ECD (bearing an N-glycosylation site at N309) with a purified LRP6PE1PE2 fragment. RESULTS 39 47 binds to protein_state To support the hypothesis that KRM1CUB binds to LRP6PE2, we used SPR and compared binding of the wild-type and the GlycoCUB mutant of KRM1ECD (bearing an N-glycosylation site at N309) with a purified LRP6PE1PE2 fragment. RESULTS 48 52 LRP6 protein To support the hypothesis that KRM1CUB binds to LRP6PE2, we used SPR and compared binding of the wild-type and the GlycoCUB mutant of KRM1ECD (bearing an N-glycosylation site at N309) with a purified LRP6PE1PE2 fragment. RESULTS 52 55 PE2 structure_element To support the hypothesis that KRM1CUB binds to LRP6PE2, we used SPR and compared binding of the wild-type and the GlycoCUB mutant of KRM1ECD (bearing an N-glycosylation site at N309) with a purified LRP6PE1PE2 fragment. RESULTS 65 68 SPR experimental_method To support the hypothesis that KRM1CUB binds to LRP6PE2, we used SPR and compared binding of the wild-type and the GlycoCUB mutant of KRM1ECD (bearing an N-glycosylation site at N309) with a purified LRP6PE1PE2 fragment. RESULTS 97 106 wild-type protein_state To support the hypothesis that KRM1CUB binds to LRP6PE2, we used SPR and compared binding of the wild-type and the GlycoCUB mutant of KRM1ECD (bearing an N-glycosylation site at N309) with a purified LRP6PE1PE2 fragment. RESULTS 115 130 GlycoCUB mutant protein_state To support the hypothesis that KRM1CUB binds to LRP6PE2, we used SPR and compared binding of the wild-type and the GlycoCUB mutant of KRM1ECD (bearing an N-glycosylation site at N309) with a purified LRP6PE1PE2 fragment. RESULTS 134 138 KRM1 protein To support the hypothesis that KRM1CUB binds to LRP6PE2, we used SPR and compared binding of the wild-type and the GlycoCUB mutant of KRM1ECD (bearing an N-glycosylation site at N309) with a purified LRP6PE1PE2 fragment. RESULTS 138 141 ECD structure_element To support the hypothesis that KRM1CUB binds to LRP6PE2, we used SPR and compared binding of the wild-type and the GlycoCUB mutant of KRM1ECD (bearing an N-glycosylation site at N309) with a purified LRP6PE1PE2 fragment. RESULTS 154 174 N-glycosylation site site To support the hypothesis that KRM1CUB binds to LRP6PE2, we used SPR and compared binding of the wild-type and the GlycoCUB mutant of KRM1ECD (bearing an N-glycosylation site at N309) with a purified LRP6PE1PE2 fragment. RESULTS 178 182 N309 residue_name_number To support the hypothesis that KRM1CUB binds to LRP6PE2, we used SPR and compared binding of the wild-type and the GlycoCUB mutant of KRM1ECD (bearing an N-glycosylation site at N309) with a purified LRP6PE1PE2 fragment. RESULTS 200 204 LRP6 protein To support the hypothesis that KRM1CUB binds to LRP6PE2, we used SPR and compared binding of the wild-type and the GlycoCUB mutant of KRM1ECD (bearing an N-glycosylation site at N309) with a purified LRP6PE1PE2 fragment. RESULTS 204 210 PE1PE2 structure_element To support the hypothesis that KRM1CUB binds to LRP6PE2, we used SPR and compared binding of the wild-type and the GlycoCUB mutant of KRM1ECD (bearing an N-glycosylation site at N309) with a purified LRP6PE1PE2 fragment. RESULTS 29 39 absence of protein_state Indeed, we found that in the absence of Dkk, KRM1ECD bound with considerable affinity to LRP6PE1PE2 (Figure 3C). RESULTS 40 43 Dkk protein_type Indeed, we found that in the absence of Dkk, KRM1ECD bound with considerable affinity to LRP6PE1PE2 (Figure 3C). RESULTS 45 49 KRM1 protein Indeed, we found that in the absence of Dkk, KRM1ECD bound with considerable affinity to LRP6PE1PE2 (Figure 3C). RESULTS 49 52 ECD structure_element Indeed, we found that in the absence of Dkk, KRM1ECD bound with considerable affinity to LRP6PE1PE2 (Figure 3C). RESULTS 53 58 bound protein_state Indeed, we found that in the absence of Dkk, KRM1ECD bound with considerable affinity to LRP6PE1PE2 (Figure 3C). RESULTS 86 88 to protein_state Indeed, we found that in the absence of Dkk, KRM1ECD bound with considerable affinity to LRP6PE1PE2 (Figure 3C). RESULTS 89 93 LRP6 protein Indeed, we found that in the absence of Dkk, KRM1ECD bound with considerable affinity to LRP6PE1PE2 (Figure 3C). RESULTS 93 99 PE1PE2 structure_element Indeed, we found that in the absence of Dkk, KRM1ECD bound with considerable affinity to LRP6PE1PE2 (Figure 3C). RESULTS 55 59 KRM1 protein In contrast, no saturable binding was observed between KRM1 and LRP6PE3PE4. RESULTS 64 68 LRP6 protein In contrast, no saturable binding was observed between KRM1 and LRP6PE3PE4. RESULTS 68 74 PE3PE4 structure_element In contrast, no saturable binding was observed between KRM1 and LRP6PE3PE4. RESULTS 0 15 Introduction of experimental_method Introduction of an N-glycosylation site at N309 in KRM1ECD abolished LRP6PE1PE2 binding (Figure 3C), while binding to DKK1 was unaffected (Figure 2D). RESULTS 19 39 N-glycosylation site site Introduction of an N-glycosylation site at N309 in KRM1ECD abolished LRP6PE1PE2 binding (Figure 3C), while binding to DKK1 was unaffected (Figure 2D). RESULTS 43 47 N309 residue_name_number Introduction of an N-glycosylation site at N309 in KRM1ECD abolished LRP6PE1PE2 binding (Figure 3C), while binding to DKK1 was unaffected (Figure 2D). RESULTS 51 55 KRM1 protein Introduction of an N-glycosylation site at N309 in KRM1ECD abolished LRP6PE1PE2 binding (Figure 3C), while binding to DKK1 was unaffected (Figure 2D). RESULTS 55 58 ECD structure_element Introduction of an N-glycosylation site at N309 in KRM1ECD abolished LRP6PE1PE2 binding (Figure 3C), while binding to DKK1 was unaffected (Figure 2D). RESULTS 69 73 LRP6 protein Introduction of an N-glycosylation site at N309 in KRM1ECD abolished LRP6PE1PE2 binding (Figure 3C), while binding to DKK1 was unaffected (Figure 2D). RESULTS 73 79 PE1PE2 structure_element Introduction of an N-glycosylation site at N309 in KRM1ECD abolished LRP6PE1PE2 binding (Figure 3C), while binding to DKK1 was unaffected (Figure 2D). RESULTS 118 122 DKK1 protein Introduction of an N-glycosylation site at N309 in KRM1ECD abolished LRP6PE1PE2 binding (Figure 3C), while binding to DKK1 was unaffected (Figure 2D). RESULTS 31 43 binding site site We conclude that the predicted binding site between KRM1CUB and LRP6PE2 is a strong candidate for mediating the direct Lrp6-Krm interaction, which is thought to increase Wnt responsiveness by stabilizing Lrp6 at the cell surface. RESULTS 52 56 KRM1 protein We conclude that the predicted binding site between KRM1CUB and LRP6PE2 is a strong candidate for mediating the direct Lrp6-Krm interaction, which is thought to increase Wnt responsiveness by stabilizing Lrp6 at the cell surface. RESULTS 56 59 CUB structure_element We conclude that the predicted binding site between KRM1CUB and LRP6PE2 is a strong candidate for mediating the direct Lrp6-Krm interaction, which is thought to increase Wnt responsiveness by stabilizing Lrp6 at the cell surface. RESULTS 64 68 LRP6 protein We conclude that the predicted binding site between KRM1CUB and LRP6PE2 is a strong candidate for mediating the direct Lrp6-Krm interaction, which is thought to increase Wnt responsiveness by stabilizing Lrp6 at the cell surface. RESULTS 68 71 PE2 structure_element We conclude that the predicted binding site between KRM1CUB and LRP6PE2 is a strong candidate for mediating the direct Lrp6-Krm interaction, which is thought to increase Wnt responsiveness by stabilizing Lrp6 at the cell surface. RESULTS 119 127 Lrp6-Krm complex_assembly We conclude that the predicted binding site between KRM1CUB and LRP6PE2 is a strong candidate for mediating the direct Lrp6-Krm interaction, which is thought to increase Wnt responsiveness by stabilizing Lrp6 at the cell surface. RESULTS 170 173 Wnt protein_type We conclude that the predicted binding site between KRM1CUB and LRP6PE2 is a strong candidate for mediating the direct Lrp6-Krm interaction, which is thought to increase Wnt responsiveness by stabilizing Lrp6 at the cell surface. RESULTS 204 208 Lrp6 protein We conclude that the predicted binding site between KRM1CUB and LRP6PE2 is a strong candidate for mediating the direct Lrp6-Krm interaction, which is thought to increase Wnt responsiveness by stabilizing Lrp6 at the cell surface. RESULTS 55 67 binding site site Further experiments are required to pinpoint the exact binding site. RESULTS 9 13 LRP6 protein Although LRP6PE1 appears somewhat out of reach in the modeled ternary complex, it cannot be excluded as the Krm binding site in the ternary complex and LRP6-Krm binary complex. RESULTS 13 16 PE1 structure_element Although LRP6PE1 appears somewhat out of reach in the modeled ternary complex, it cannot be excluded as the Krm binding site in the ternary complex and LRP6-Krm binary complex. RESULTS 108 124 Krm binding site site Although LRP6PE1 appears somewhat out of reach in the modeled ternary complex, it cannot be excluded as the Krm binding site in the ternary complex and LRP6-Krm binary complex. RESULTS 152 160 LRP6-Krm complex_assembly Although LRP6PE1 appears somewhat out of reach in the modeled ternary complex, it cannot be excluded as the Krm binding site in the ternary complex and LRP6-Krm binary complex. RESULTS 4 15 presence of protein_state The presence of DKK may govern which propeller (PE1 versus PE2) of LRP6 is available for Krm binding. RESULTS 16 19 DKK protein The presence of DKK may govern which propeller (PE1 versus PE2) of LRP6 is available for Krm binding. RESULTS 37 46 propeller structure_element The presence of DKK may govern which propeller (PE1 versus PE2) of LRP6 is available for Krm binding. RESULTS 48 51 PE1 structure_element The presence of DKK may govern which propeller (PE1 versus PE2) of LRP6 is available for Krm binding. RESULTS 59 62 PE2 structure_element The presence of DKK may govern which propeller (PE1 versus PE2) of LRP6 is available for Krm binding. RESULTS 67 71 LRP6 protein The presence of DKK may govern which propeller (PE1 versus PE2) of LRP6 is available for Krm binding. RESULTS 89 92 Krm protein_type The presence of DKK may govern which propeller (PE1 versus PE2) of LRP6 is available for Krm binding. RESULTS 37 62 KRM1CUB-LRP6PE2 interface site Apparent binding across the proposed KRM1CUB-LRP6PE2 interface is expected to be higher once Krm is also cross-linked to LRP6PE3 via DKK1CRD2 (Figure 3D). RESULTS 93 96 Krm protein_type Apparent binding across the proposed KRM1CUB-LRP6PE2 interface is expected to be higher once Krm is also cross-linked to LRP6PE3 via DKK1CRD2 (Figure 3D). RESULTS 121 125 LRP6 protein Apparent binding across the proposed KRM1CUB-LRP6PE2 interface is expected to be higher once Krm is also cross-linked to LRP6PE3 via DKK1CRD2 (Figure 3D). RESULTS 125 128 PE3 structure_element Apparent binding across the proposed KRM1CUB-LRP6PE2 interface is expected to be higher once Krm is also cross-linked to LRP6PE3 via DKK1CRD2 (Figure 3D). RESULTS 133 137 DKK1 protein Apparent binding across the proposed KRM1CUB-LRP6PE2 interface is expected to be higher once Krm is also cross-linked to LRP6PE3 via DKK1CRD2 (Figure 3D). RESULTS 137 141 CRD2 structure_element Apparent binding across the proposed KRM1CUB-LRP6PE2 interface is expected to be higher once Krm is also cross-linked to LRP6PE3 via DKK1CRD2 (Figure 3D). RESULTS 15 32 negative-stain EM experimental_method Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 37 65 small-angle X-ray scattering experimental_method Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 77 81 LRP6 protein Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 81 93 PE1PE2PE3PE4 structure_element Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 95 107 in isolation protein_state Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 112 127 in complex with protein_state Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 128 132 Dkk1 protein_type Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 139 156 negative-stain EM experimental_method Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 160 171 full-length protein_state Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 172 176 LRP6 protein Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 177 187 ectodomain structure_element Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 204 210 curved protein_state Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 212 225 platform-like protein_state Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 279 282 PE2 structure_element Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 287 290 PE3 structure_element Low-resolution negative-stain EM and small-angle X-ray scattering studies of LRP6PE1PE2PE3PE4, in isolation and in complex with Dkk1, plus negative-stain EM of full-length LRP6 ectodomain, have indicated curved, platform-like conformations but also potential flexibility between PE2 and PE3. RESULTS 47 50 Krm protein_type It is therefore possible that the interplay of Krm and Dkk binding can promote changes in LRP6 ectodomain conformation with functional consequences; however, such ideas await investigation. RESULTS 55 58 Dkk protein_type It is therefore possible that the interplay of Krm and Dkk binding can promote changes in LRP6 ectodomain conformation with functional consequences; however, such ideas await investigation. RESULTS 90 94 LRP6 protein It is therefore possible that the interplay of Krm and Dkk binding can promote changes in LRP6 ectodomain conformation with functional consequences; however, such ideas await investigation. RESULTS 95 105 ectodomain structure_element It is therefore possible that the interplay of Krm and Dkk binding can promote changes in LRP6 ectodomain conformation with functional consequences; however, such ideas await investigation. RESULTS 20 54 structural and biophysical studies experimental_method Taken together, the structural and biophysical studies we report here extend our mechanistic understanding of Wnt signal regulation. RESULTS 110 113 Wnt protein_type Taken together, the structural and biophysical studies we report here extend our mechanistic understanding of Wnt signal regulation. RESULTS 16 26 ectodomain structure_element We describe the ectodomain structure of the dual Wnt regulator Krm1, providing an explanation for the detrimental effect on health and development of a homozygous KRM1 mutation. RESULTS 27 36 structure evidence We describe the ectodomain structure of the dual Wnt regulator Krm1, providing an explanation for the detrimental effect on health and development of a homozygous KRM1 mutation. RESULTS 49 52 Wnt protein_type We describe the ectodomain structure of the dual Wnt regulator Krm1, providing an explanation for the detrimental effect on health and development of a homozygous KRM1 mutation. RESULTS 63 67 Krm1 protein_type We describe the ectodomain structure of the dual Wnt regulator Krm1, providing an explanation for the detrimental effect on health and development of a homozygous KRM1 mutation. RESULTS 163 167 KRM1 protein We describe the ectodomain structure of the dual Wnt regulator Krm1, providing an explanation for the detrimental effect on health and development of a homozygous KRM1 mutation. RESULTS 39 46 Krm-Dkk complex_assembly We also reveal the interaction mode of Krm-Dkk and the architecture of the ternary complex formed by Lrp5/6, Dkk, and Krm. RESULTS 101 107 Lrp5/6 protein_type We also reveal the interaction mode of Krm-Dkk and the architecture of the ternary complex formed by Lrp5/6, Dkk, and Krm. RESULTS 109 112 Dkk protein_type We also reveal the interaction mode of Krm-Dkk and the architecture of the ternary complex formed by Lrp5/6, Dkk, and Krm. RESULTS 118 121 Krm protein_type We also reveal the interaction mode of Krm-Dkk and the architecture of the ternary complex formed by Lrp5/6, Dkk, and Krm. RESULTS 25 42 crystal structure evidence Furthermore, the ternary crystal structure has guided in silico and biophysical analyses to suggest a direct LRP6-KRM1 interaction site. RESULTS 54 88 in silico and biophysical analyses experimental_method Furthermore, the ternary crystal structure has guided in silico and biophysical analyses to suggest a direct LRP6-KRM1 interaction site. RESULTS 109 135 LRP6-KRM1 interaction site site Furthermore, the ternary crystal structure has guided in silico and biophysical analyses to suggest a direct LRP6-KRM1 interaction site. RESULTS 136 139 Krm protein_type Our findings provide a solid foundation for additional studies to probe how ternary complex formation triggers internalization, whereas Krm binding in the absence of Dkk stabilizes the Wnt co-receptor at the cell surface. RESULTS 155 165 absence of protein_state Our findings provide a solid foundation for additional studies to probe how ternary complex formation triggers internalization, whereas Krm binding in the absence of Dkk stabilizes the Wnt co-receptor at the cell surface. RESULTS 166 169 Dkk protein_type Our findings provide a solid foundation for additional studies to probe how ternary complex formation triggers internalization, whereas Krm binding in the absence of Dkk stabilizes the Wnt co-receptor at the cell surface. RESULTS 185 188 Wnt protein_type Our findings provide a solid foundation for additional studies to probe how ternary complex formation triggers internalization, whereas Krm binding in the absence of Dkk stabilizes the Wnt co-receptor at the cell surface. RESULTS 189 200 co-receptor protein_type Our findings provide a solid foundation for additional studies to probe how ternary complex formation triggers internalization, whereas Krm binding in the absence of Dkk stabilizes the Wnt co-receptor at the cell surface. RESULTS 0 9 Structure evidence Structure of Unliganded KRM1ECD FIG 13 23 Unliganded protein_state Structure of Unliganded KRM1ECD FIG 24 28 KRM1 protein Structure of Unliganded KRM1ECD FIG 28 31 ECD structure_element Structure of Unliganded KRM1ECD FIG 8 12 KRM1 protein (A) The KRM1ECD fold (crystal form I) colored blue to red from the N to C terminus. FIG 12 15 ECD structure_element (A) The KRM1ECD fold (crystal form I) colored blue to red from the N to C terminus. FIG 22 36 crystal form I evidence (A) The KRM1ECD fold (crystal form I) colored blue to red from the N to C terminus. FIG 0 9 Cysteines residue_name Cysteines as ball and sticks, glycosylation sites as sticks. FIG 30 49 glycosylation sites site Cysteines as ball and sticks, glycosylation sites as sticks. FIG 10 17 calcium chemical The bound calcium is shown as a gray sphere. FIG 16 21 F207S mutant The site of the F207S mutation associated with ectodermal dysplasia in humans is shown as mesh. FIG 71 77 humans species The site of the F207S mutation associated with ectodermal dysplasia in humans is shown as mesh. FIG 4 17 Superposition experimental_method (B) Superposition of the three KRM1ECD subdomains (solid) with their next structurally characterized homologs (half transparent). FIG 31 35 KRM1 protein (B) Superposition of the three KRM1ECD subdomains (solid) with their next structurally characterized homologs (half transparent). FIG 35 38 ECD structure_element (B) Superposition of the three KRM1ECD subdomains (solid) with their next structurally characterized homologs (half transparent). FIG 4 17 Superposition experimental_method (C) Superposition of KRM1ECD from the three crystal forms. FIG 21 25 KRM1 protein (C) Superposition of KRM1ECD from the three crystal forms. FIG 25 28 ECD structure_element (C) Superposition of KRM1ECD from the three crystal forms. FIG 44 57 crystal forms evidence (C) Superposition of KRM1ECD from the three crystal forms. FIG 0 16 Alignment scores evidence Alignment scores for each pairing are indicated on the dashed triangle. FIG 8 17 structure evidence (A) The structure of the ternary LRP6PE3PE4-DKK1CRD2-KRM1ECD complex. FIG 33 60 LRP6PE3PE4-DKK1CRD2-KRM1ECD complex_assembly (A) The structure of the ternary LRP6PE3PE4-DKK1CRD2-KRM1ECD complex. FIG 0 4 DKK1 protein DKK1 (orange) is sandwiched between the PE3 module of LRP6 (blue) and the KR-WSC domain pair of KRM1 (green). FIG 40 43 PE3 structure_element DKK1 (orange) is sandwiched between the PE3 module of LRP6 (blue) and the KR-WSC domain pair of KRM1 (green). FIG 54 58 LRP6 protein DKK1 (orange) is sandwiched between the PE3 module of LRP6 (blue) and the KR-WSC domain pair of KRM1 (green). FIG 74 80 KR-WSC structure_element DKK1 (orange) is sandwiched between the PE3 module of LRP6 (blue) and the KR-WSC domain pair of KRM1 (green). FIG 96 100 KRM1 protein DKK1 (orange) is sandwiched between the PE3 module of LRP6 (blue) and the KR-WSC domain pair of KRM1 (green). FIG 36 61 N-glycan attachment sites site Colored symbols indicate introduced N-glycan attachment sites (see D). FIG 4 7 SPR experimental_method (B) SPR data comparing binding of full-length DKK1 and SUMO fusions of DKK1 truncations for binding to immobilized wild-type KRM1ECD. FIG 34 45 full-length protein_state (B) SPR data comparing binding of full-length DKK1 and SUMO fusions of DKK1 truncations for binding to immobilized wild-type KRM1ECD. FIG 46 50 DKK1 protein (B) SPR data comparing binding of full-length DKK1 and SUMO fusions of DKK1 truncations for binding to immobilized wild-type KRM1ECD. FIG 55 67 SUMO fusions experimental_method (B) SPR data comparing binding of full-length DKK1 and SUMO fusions of DKK1 truncations for binding to immobilized wild-type KRM1ECD. FIG 71 75 DKK1 protein (B) SPR data comparing binding of full-length DKK1 and SUMO fusions of DKK1 truncations for binding to immobilized wild-type KRM1ECD. FIG 115 124 wild-type protein_state (B) SPR data comparing binding of full-length DKK1 and SUMO fusions of DKK1 truncations for binding to immobilized wild-type KRM1ECD. FIG 125 129 KRM1 protein (B) SPR data comparing binding of full-length DKK1 and SUMO fusions of DKK1 truncations for binding to immobilized wild-type KRM1ECD. FIG 129 132 ECD structure_element (B) SPR data comparing binding of full-length DKK1 and SUMO fusions of DKK1 truncations for binding to immobilized wild-type KRM1ECD. FIG 25 51 DKK1CRD2-KRM1ECD interface site (C) Close-up view of the DKK1CRD2-KRM1ECD interface. FIG 21 30 interface site Residues involved in interface formation are shown as sticks; those mentioned in the text are labeled. FIG 0 12 Salt bridges bond_interaction Salt bridges are in pink and hydrogen bonds in black. FIG 29 43 hydrogen bonds bond_interaction Salt bridges are in pink and hydrogen bonds in black. FIG 4 7 SPR experimental_method (D) SPR binding data comparing DKK1 analyte binding with wild-type KRM1ECD and three variants bearing engineered glycosylation sites on the KR and WSC domains (green and blue pointing to DKK1) and on the CUB domain (orange). FIG 8 20 binding data evidence (D) SPR binding data comparing DKK1 analyte binding with wild-type KRM1ECD and three variants bearing engineered glycosylation sites on the KR and WSC domains (green and blue pointing to DKK1) and on the CUB domain (orange). FIG 31 35 DKK1 protein (D) SPR binding data comparing DKK1 analyte binding with wild-type KRM1ECD and three variants bearing engineered glycosylation sites on the KR and WSC domains (green and blue pointing to DKK1) and on the CUB domain (orange). FIG 57 66 wild-type protein_state (D) SPR binding data comparing DKK1 analyte binding with wild-type KRM1ECD and three variants bearing engineered glycosylation sites on the KR and WSC domains (green and blue pointing to DKK1) and on the CUB domain (orange). FIG 67 71 KRM1 protein (D) SPR binding data comparing DKK1 analyte binding with wild-type KRM1ECD and three variants bearing engineered glycosylation sites on the KR and WSC domains (green and blue pointing to DKK1) and on the CUB domain (orange). FIG 71 74 ECD structure_element (D) SPR binding data comparing DKK1 analyte binding with wild-type KRM1ECD and three variants bearing engineered glycosylation sites on the KR and WSC domains (green and blue pointing to DKK1) and on the CUB domain (orange). FIG 102 112 engineered protein_state (D) SPR binding data comparing DKK1 analyte binding with wild-type KRM1ECD and three variants bearing engineered glycosylation sites on the KR and WSC domains (green and blue pointing to DKK1) and on the CUB domain (orange). FIG 113 132 glycosylation sites site (D) SPR binding data comparing DKK1 analyte binding with wild-type KRM1ECD and three variants bearing engineered glycosylation sites on the KR and WSC domains (green and blue pointing to DKK1) and on the CUB domain (orange). FIG 140 142 KR structure_element (D) SPR binding data comparing DKK1 analyte binding with wild-type KRM1ECD and three variants bearing engineered glycosylation sites on the KR and WSC domains (green and blue pointing to DKK1) and on the CUB domain (orange). FIG 147 150 WSC structure_element (D) SPR binding data comparing DKK1 analyte binding with wild-type KRM1ECD and three variants bearing engineered glycosylation sites on the KR and WSC domains (green and blue pointing to DKK1) and on the CUB domain (orange). FIG 187 191 DKK1 protein (D) SPR binding data comparing DKK1 analyte binding with wild-type KRM1ECD and three variants bearing engineered glycosylation sites on the KR and WSC domains (green and blue pointing to DKK1) and on the CUB domain (orange). FIG 204 207 CUB structure_element (D) SPR binding data comparing DKK1 analyte binding with wild-type KRM1ECD and three variants bearing engineered glycosylation sites on the KR and WSC domains (green and blue pointing to DKK1) and on the CUB domain (orange). FIG 0 9 LRP6-KRM1 complex_assembly LRP6-KRM1 Direct Interaction and Summary FIG 35 47 complex with protein_state (A) In a construction of a ternary complex with all four β propellers of LRP6 intact, the CUB domain points via its Ca2+-binding region toward the top face of the second β propeller. FIG 57 69 β propellers structure_element (A) In a construction of a ternary complex with all four β propellers of LRP6 intact, the CUB domain points via its Ca2+-binding region toward the top face of the second β propeller. FIG 73 77 LRP6 protein (A) In a construction of a ternary complex with all four β propellers of LRP6 intact, the CUB domain points via its Ca2+-binding region toward the top face of the second β propeller. FIG 78 84 intact protein_state (A) In a construction of a ternary complex with all four β propellers of LRP6 intact, the CUB domain points via its Ca2+-binding region toward the top face of the second β propeller. FIG 90 93 CUB structure_element (A) In a construction of a ternary complex with all four β propellers of LRP6 intact, the CUB domain points via its Ca2+-binding region toward the top face of the second β propeller. FIG 116 135 Ca2+-binding region site (A) In a construction of a ternary complex with all four β propellers of LRP6 intact, the CUB domain points via its Ca2+-binding region toward the top face of the second β propeller. FIG 163 181 second β propeller structure_element (A) In a construction of a ternary complex with all four β propellers of LRP6 intact, the CUB domain points via its Ca2+-binding region toward the top face of the second β propeller. FIG 35 51 interaction site site (B) Close-up view of the potential interaction site. FIG 13 17 LRP6 protein In addition, LRP6PE2 has been superimposed with DKK1 (yellow) and SOST (pink) peptide complexes of LRP6PE1. FIG 17 20 PE2 structure_element In addition, LRP6PE2 has been superimposed with DKK1 (yellow) and SOST (pink) peptide complexes of LRP6PE1. FIG 30 42 superimposed experimental_method In addition, LRP6PE2 has been superimposed with DKK1 (yellow) and SOST (pink) peptide complexes of LRP6PE1. FIG 48 52 DKK1 protein In addition, LRP6PE2 has been superimposed with DKK1 (yellow) and SOST (pink) peptide complexes of LRP6PE1. FIG 66 70 SOST protein In addition, LRP6PE2 has been superimposed with DKK1 (yellow) and SOST (pink) peptide complexes of LRP6PE1. FIG 99 103 LRP6 protein In addition, LRP6PE2 has been superimposed with DKK1 (yellow) and SOST (pink) peptide complexes of LRP6PE1. FIG 103 106 PE1 structure_element In addition, LRP6PE2 has been superimposed with DKK1 (yellow) and SOST (pink) peptide complexes of LRP6PE1. FIG 4 20 SPR measurements experimental_method (C) SPR measurements comparing LRP6PE1PE2 binding with wild-type KRM1ECD and the GlycoCUB mutant bearing an N-glycan at N309. FIG 31 35 LRP6 protein (C) SPR measurements comparing LRP6PE1PE2 binding with wild-type KRM1ECD and the GlycoCUB mutant bearing an N-glycan at N309. FIG 35 41 PE1PE2 structure_element (C) SPR measurements comparing LRP6PE1PE2 binding with wild-type KRM1ECD and the GlycoCUB mutant bearing an N-glycan at N309. FIG 55 64 wild-type protein_state (C) SPR measurements comparing LRP6PE1PE2 binding with wild-type KRM1ECD and the GlycoCUB mutant bearing an N-glycan at N309. FIG 65 69 KRM1 protein (C) SPR measurements comparing LRP6PE1PE2 binding with wild-type KRM1ECD and the GlycoCUB mutant bearing an N-glycan at N309. FIG 69 72 ECD structure_element (C) SPR measurements comparing LRP6PE1PE2 binding with wild-type KRM1ECD and the GlycoCUB mutant bearing an N-glycan at N309. FIG 81 96 GlycoCUB mutant protein_state (C) SPR measurements comparing LRP6PE1PE2 binding with wild-type KRM1ECD and the GlycoCUB mutant bearing an N-glycan at N309. FIG 108 116 N-glycan ptm (C) SPR measurements comparing LRP6PE1PE2 binding with wild-type KRM1ECD and the GlycoCUB mutant bearing an N-glycan at N309. FIG 120 124 N309 residue_name_number (C) SPR measurements comparing LRP6PE1PE2 binding with wild-type KRM1ECD and the GlycoCUB mutant bearing an N-glycan at N309. FIG 95 98 Wnt protein_type (D) Schematic representation of structural and biophysical findings and their implications for Wnt-dependent (left, middle) and independent (right) signaling. FIG 48 52 LRP6 protein Conformational differences in the depictions of LRP6 are included purely for ease of representation. FIG 0 37 Diffraction and Refinement Statistics evidence Diffraction and Refinement Statistics TABLE 1 5 KRM1 protein " KRM1ECD KRM1ECD KRM1ECD KRM1ECD LRP6PE3PE4-DKKCRD2-KRM1ECD Crystal form I I II III I X-ray source Diamond i04 Diamond i03 Diamond i03 Diamond i04 Diamond i04 Wavelength (Å) 0.9793 0.9700 0.9700 0.9795 0.9795 Space group P3121 P3121 P43 P41212 C2221 Unit cell a/α (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 86.9/90 b/β (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 100.1/90 c/γ (Å/°) 188.4/120 187.4/120 75.0/90 198.2/90 270.7/90 Wilson B factor (Å2) 31 41 76 77 NA Resolution range (Å) 47.10–1.90 (1.95–1.90) 62.47–2.10 (2.16–2.10) 75.00–2.80 (2.99–2.80) 67.80–3.20 (3.42–3.20) 67.68–3.50 (7.16–6.40, 3.92–3.50) Unique reflections 23,300 (1,524) 17,089 (1,428) 7,964 (1,448) 8,171 (1,343) 8,070 (723, 645) Average multiplicity 9.1 (9.2) 5.2 (5.3) 3.7 (3.7) 22.7 (12.6) 3.8 (3.5, 4.4) Completeness (%) 99.8 (98.5) 100 (100) 99.8 (100) 98.8 (93.4) 51.6 (98.5, 14.1) 11.4 (1.7) 12.0 (1.7) 14.9 (1.5) 13.1 (1.9) 4.6 (4.1, 2.2) Rmerge (%) 14.8 (158.3) 9.3 (98.0) 6.2 (98.9) 29.8 (142.2) 44.9 (40.5, 114.2) Rpim (%) 15.7 (55.3) 10.3 (109.0) 3.7 (53.8) 6.3 (40.0) 24.7 (23.9, 59.9) Refinement Rwork (%) 17.9 18.4 21.6 20.2 32.1 Rfree (%) 22.7 23.2 30.7 27.1 35.5 No. of Non-Hydrogen Atoms Protein 2,260 2,301 2,102 2,305 7,730 N-glycans 42 42 28 28 0 Water 79 54 0 2 0 Ligands 6 6 2 5 0 Average B factor (Å2) Protein 63 65 108 84 – N-glycans 35 46 102 18 – Water 68 85 – 75 – Ligands 36 47 91 75 66 RMSD from Ideality Bond lengths (Å) 0.020 0.016 0.019 0.016 0.004 Bond angles (°) 2.050 1.748 1.952 1.796 0.770 Ramachandran Plot Favored (%) 96.8 95.5 96.9 94.9 92.3 Allowed (%) 99.7 100.0 100.0 99.7 99.8 Number of outliers 1 0 0 1 2 PDB code 5FWS 5FWT 5FWU 5FWV 5FWW " TABLE 5 8 ECD structure_element " KRM1ECD KRM1ECD KRM1ECD KRM1ECD LRP6PE3PE4-DKKCRD2-KRM1ECD Crystal form I I II III I X-ray source Diamond i04 Diamond i03 Diamond i03 Diamond i04 Diamond i04 Wavelength (Å) 0.9793 0.9700 0.9700 0.9795 0.9795 Space group P3121 P3121 P43 P41212 C2221 Unit cell a/α (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 86.9/90 b/β (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 100.1/90 c/γ (Å/°) 188.4/120 187.4/120 75.0/90 198.2/90 270.7/90 Wilson B factor (Å2) 31 41 76 77 NA Resolution range (Å) 47.10–1.90 (1.95–1.90) 62.47–2.10 (2.16–2.10) 75.00–2.80 (2.99–2.80) 67.80–3.20 (3.42–3.20) 67.68–3.50 (7.16–6.40, 3.92–3.50) Unique reflections 23,300 (1,524) 17,089 (1,428) 7,964 (1,448) 8,171 (1,343) 8,070 (723, 645) Average multiplicity 9.1 (9.2) 5.2 (5.3) 3.7 (3.7) 22.7 (12.6) 3.8 (3.5, 4.4) Completeness (%) 99.8 (98.5) 100 (100) 99.8 (100) 98.8 (93.4) 51.6 (98.5, 14.1) 11.4 (1.7) 12.0 (1.7) 14.9 (1.5) 13.1 (1.9) 4.6 (4.1, 2.2) Rmerge (%) 14.8 (158.3) 9.3 (98.0) 6.2 (98.9) 29.8 (142.2) 44.9 (40.5, 114.2) Rpim (%) 15.7 (55.3) 10.3 (109.0) 3.7 (53.8) 6.3 (40.0) 24.7 (23.9, 59.9) Refinement Rwork (%) 17.9 18.4 21.6 20.2 32.1 Rfree (%) 22.7 23.2 30.7 27.1 35.5 No. of Non-Hydrogen Atoms Protein 2,260 2,301 2,102 2,305 7,730 N-glycans 42 42 28 28 0 Water 79 54 0 2 0 Ligands 6 6 2 5 0 Average B factor (Å2) Protein 63 65 108 84 – N-glycans 35 46 102 18 – Water 68 85 – 75 – Ligands 36 47 91 75 66 RMSD from Ideality Bond lengths (Å) 0.020 0.016 0.019 0.016 0.004 Bond angles (°) 2.050 1.748 1.952 1.796 0.770 Ramachandran Plot Favored (%) 96.8 95.5 96.9 94.9 92.3 Allowed (%) 99.7 100.0 100.0 99.7 99.8 Number of outliers 1 0 0 1 2 PDB code 5FWS 5FWT 5FWU 5FWV 5FWW " TABLE 9 13 KRM1 protein " KRM1ECD KRM1ECD KRM1ECD KRM1ECD LRP6PE3PE4-DKKCRD2-KRM1ECD Crystal form I I II III I X-ray source Diamond i04 Diamond i03 Diamond i03 Diamond i04 Diamond i04 Wavelength (Å) 0.9793 0.9700 0.9700 0.9795 0.9795 Space group P3121 P3121 P43 P41212 C2221 Unit cell a/α (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 86.9/90 b/β (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 100.1/90 c/γ (Å/°) 188.4/120 187.4/120 75.0/90 198.2/90 270.7/90 Wilson B factor (Å2) 31 41 76 77 NA Resolution range (Å) 47.10–1.90 (1.95–1.90) 62.47–2.10 (2.16–2.10) 75.00–2.80 (2.99–2.80) 67.80–3.20 (3.42–3.20) 67.68–3.50 (7.16–6.40, 3.92–3.50) Unique reflections 23,300 (1,524) 17,089 (1,428) 7,964 (1,448) 8,171 (1,343) 8,070 (723, 645) Average multiplicity 9.1 (9.2) 5.2 (5.3) 3.7 (3.7) 22.7 (12.6) 3.8 (3.5, 4.4) Completeness (%) 99.8 (98.5) 100 (100) 99.8 (100) 98.8 (93.4) 51.6 (98.5, 14.1) 11.4 (1.7) 12.0 (1.7) 14.9 (1.5) 13.1 (1.9) 4.6 (4.1, 2.2) Rmerge (%) 14.8 (158.3) 9.3 (98.0) 6.2 (98.9) 29.8 (142.2) 44.9 (40.5, 114.2) Rpim (%) 15.7 (55.3) 10.3 (109.0) 3.7 (53.8) 6.3 (40.0) 24.7 (23.9, 59.9) Refinement Rwork (%) 17.9 18.4 21.6 20.2 32.1 Rfree (%) 22.7 23.2 30.7 27.1 35.5 No. of Non-Hydrogen Atoms Protein 2,260 2,301 2,102 2,305 7,730 N-glycans 42 42 28 28 0 Water 79 54 0 2 0 Ligands 6 6 2 5 0 Average B factor (Å2) Protein 63 65 108 84 – N-glycans 35 46 102 18 – Water 68 85 – 75 – Ligands 36 47 91 75 66 RMSD from Ideality Bond lengths (Å) 0.020 0.016 0.019 0.016 0.004 Bond angles (°) 2.050 1.748 1.952 1.796 0.770 Ramachandran Plot Favored (%) 96.8 95.5 96.9 94.9 92.3 Allowed (%) 99.7 100.0 100.0 99.7 99.8 Number of outliers 1 0 0 1 2 PDB code 5FWS 5FWT 5FWU 5FWV 5FWW " TABLE 13 16 ECD structure_element " KRM1ECD KRM1ECD KRM1ECD KRM1ECD LRP6PE3PE4-DKKCRD2-KRM1ECD Crystal form I I II III I X-ray source Diamond i04 Diamond i03 Diamond i03 Diamond i04 Diamond i04 Wavelength (Å) 0.9793 0.9700 0.9700 0.9795 0.9795 Space group P3121 P3121 P43 P41212 C2221 Unit cell a/α (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 86.9/90 b/β (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 100.1/90 c/γ (Å/°) 188.4/120 187.4/120 75.0/90 198.2/90 270.7/90 Wilson B factor (Å2) 31 41 76 77 NA Resolution range (Å) 47.10–1.90 (1.95–1.90) 62.47–2.10 (2.16–2.10) 75.00–2.80 (2.99–2.80) 67.80–3.20 (3.42–3.20) 67.68–3.50 (7.16–6.40, 3.92–3.50) Unique reflections 23,300 (1,524) 17,089 (1,428) 7,964 (1,448) 8,171 (1,343) 8,070 (723, 645) Average multiplicity 9.1 (9.2) 5.2 (5.3) 3.7 (3.7) 22.7 (12.6) 3.8 (3.5, 4.4) Completeness (%) 99.8 (98.5) 100 (100) 99.8 (100) 98.8 (93.4) 51.6 (98.5, 14.1) 11.4 (1.7) 12.0 (1.7) 14.9 (1.5) 13.1 (1.9) 4.6 (4.1, 2.2) Rmerge (%) 14.8 (158.3) 9.3 (98.0) 6.2 (98.9) 29.8 (142.2) 44.9 (40.5, 114.2) Rpim (%) 15.7 (55.3) 10.3 (109.0) 3.7 (53.8) 6.3 (40.0) 24.7 (23.9, 59.9) Refinement Rwork (%) 17.9 18.4 21.6 20.2 32.1 Rfree (%) 22.7 23.2 30.7 27.1 35.5 No. of Non-Hydrogen Atoms Protein 2,260 2,301 2,102 2,305 7,730 N-glycans 42 42 28 28 0 Water 79 54 0 2 0 Ligands 6 6 2 5 0 Average B factor (Å2) Protein 63 65 108 84 – N-glycans 35 46 102 18 – Water 68 85 – 75 – Ligands 36 47 91 75 66 RMSD from Ideality Bond lengths (Å) 0.020 0.016 0.019 0.016 0.004 Bond angles (°) 2.050 1.748 1.952 1.796 0.770 Ramachandran Plot Favored (%) 96.8 95.5 96.9 94.9 92.3 Allowed (%) 99.7 100.0 100.0 99.7 99.8 Number of outliers 1 0 0 1 2 PDB code 5FWS 5FWT 5FWU 5FWV 5FWW " TABLE 17 21 KRM1 protein " KRM1ECD KRM1ECD KRM1ECD KRM1ECD LRP6PE3PE4-DKKCRD2-KRM1ECD Crystal form I I II III I X-ray source Diamond i04 Diamond i03 Diamond i03 Diamond i04 Diamond i04 Wavelength (Å) 0.9793 0.9700 0.9700 0.9795 0.9795 Space group P3121 P3121 P43 P41212 C2221 Unit cell a/α (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 86.9/90 b/β (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 100.1/90 c/γ (Å/°) 188.4/120 187.4/120 75.0/90 198.2/90 270.7/90 Wilson B factor (Å2) 31 41 76 77 NA Resolution range (Å) 47.10–1.90 (1.95–1.90) 62.47–2.10 (2.16–2.10) 75.00–2.80 (2.99–2.80) 67.80–3.20 (3.42–3.20) 67.68–3.50 (7.16–6.40, 3.92–3.50) Unique reflections 23,300 (1,524) 17,089 (1,428) 7,964 (1,448) 8,171 (1,343) 8,070 (723, 645) Average multiplicity 9.1 (9.2) 5.2 (5.3) 3.7 (3.7) 22.7 (12.6) 3.8 (3.5, 4.4) Completeness (%) 99.8 (98.5) 100 (100) 99.8 (100) 98.8 (93.4) 51.6 (98.5, 14.1) 11.4 (1.7) 12.0 (1.7) 14.9 (1.5) 13.1 (1.9) 4.6 (4.1, 2.2) Rmerge (%) 14.8 (158.3) 9.3 (98.0) 6.2 (98.9) 29.8 (142.2) 44.9 (40.5, 114.2) Rpim (%) 15.7 (55.3) 10.3 (109.0) 3.7 (53.8) 6.3 (40.0) 24.7 (23.9, 59.9) Refinement Rwork (%) 17.9 18.4 21.6 20.2 32.1 Rfree (%) 22.7 23.2 30.7 27.1 35.5 No. of Non-Hydrogen Atoms Protein 2,260 2,301 2,102 2,305 7,730 N-glycans 42 42 28 28 0 Water 79 54 0 2 0 Ligands 6 6 2 5 0 Average B factor (Å2) Protein 63 65 108 84 – N-glycans 35 46 102 18 – Water 68 85 – 75 – Ligands 36 47 91 75 66 RMSD from Ideality Bond lengths (Å) 0.020 0.016 0.019 0.016 0.004 Bond angles (°) 2.050 1.748 1.952 1.796 0.770 Ramachandran Plot Favored (%) 96.8 95.5 96.9 94.9 92.3 Allowed (%) 99.7 100.0 100.0 99.7 99.8 Number of outliers 1 0 0 1 2 PDB code 5FWS 5FWT 5FWU 5FWV 5FWW " TABLE 21 24 ECD structure_element " KRM1ECD KRM1ECD KRM1ECD KRM1ECD LRP6PE3PE4-DKKCRD2-KRM1ECD Crystal form I I II III I X-ray source Diamond i04 Diamond i03 Diamond i03 Diamond i04 Diamond i04 Wavelength (Å) 0.9793 0.9700 0.9700 0.9795 0.9795 Space group P3121 P3121 P43 P41212 C2221 Unit cell a/α (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 86.9/90 b/β (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 100.1/90 c/γ (Å/°) 188.4/120 187.4/120 75.0/90 198.2/90 270.7/90 Wilson B factor (Å2) 31 41 76 77 NA Resolution range (Å) 47.10–1.90 (1.95–1.90) 62.47–2.10 (2.16–2.10) 75.00–2.80 (2.99–2.80) 67.80–3.20 (3.42–3.20) 67.68–3.50 (7.16–6.40, 3.92–3.50) Unique reflections 23,300 (1,524) 17,089 (1,428) 7,964 (1,448) 8,171 (1,343) 8,070 (723, 645) Average multiplicity 9.1 (9.2) 5.2 (5.3) 3.7 (3.7) 22.7 (12.6) 3.8 (3.5, 4.4) Completeness (%) 99.8 (98.5) 100 (100) 99.8 (100) 98.8 (93.4) 51.6 (98.5, 14.1) 11.4 (1.7) 12.0 (1.7) 14.9 (1.5) 13.1 (1.9) 4.6 (4.1, 2.2) Rmerge (%) 14.8 (158.3) 9.3 (98.0) 6.2 (98.9) 29.8 (142.2) 44.9 (40.5, 114.2) Rpim (%) 15.7 (55.3) 10.3 (109.0) 3.7 (53.8) 6.3 (40.0) 24.7 (23.9, 59.9) Refinement Rwork (%) 17.9 18.4 21.6 20.2 32.1 Rfree (%) 22.7 23.2 30.7 27.1 35.5 No. of Non-Hydrogen Atoms Protein 2,260 2,301 2,102 2,305 7,730 N-glycans 42 42 28 28 0 Water 79 54 0 2 0 Ligands 6 6 2 5 0 Average B factor (Å2) Protein 63 65 108 84 – N-glycans 35 46 102 18 – Water 68 85 – 75 – Ligands 36 47 91 75 66 RMSD from Ideality Bond lengths (Å) 0.020 0.016 0.019 0.016 0.004 Bond angles (°) 2.050 1.748 1.952 1.796 0.770 Ramachandran Plot Favored (%) 96.8 95.5 96.9 94.9 92.3 Allowed (%) 99.7 100.0 100.0 99.7 99.8 Number of outliers 1 0 0 1 2 PDB code 5FWS 5FWT 5FWU 5FWV 5FWW " TABLE 25 29 KRM1 protein " KRM1ECD KRM1ECD KRM1ECD KRM1ECD LRP6PE3PE4-DKKCRD2-KRM1ECD Crystal form I I II III I X-ray source Diamond i04 Diamond i03 Diamond i03 Diamond i04 Diamond i04 Wavelength (Å) 0.9793 0.9700 0.9700 0.9795 0.9795 Space group P3121 P3121 P43 P41212 C2221 Unit cell a/α (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 86.9/90 b/β (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 100.1/90 c/γ (Å/°) 188.4/120 187.4/120 75.0/90 198.2/90 270.7/90 Wilson B factor (Å2) 31 41 76 77 NA Resolution range (Å) 47.10–1.90 (1.95–1.90) 62.47–2.10 (2.16–2.10) 75.00–2.80 (2.99–2.80) 67.80–3.20 (3.42–3.20) 67.68–3.50 (7.16–6.40, 3.92–3.50) Unique reflections 23,300 (1,524) 17,089 (1,428) 7,964 (1,448) 8,171 (1,343) 8,070 (723, 645) Average multiplicity 9.1 (9.2) 5.2 (5.3) 3.7 (3.7) 22.7 (12.6) 3.8 (3.5, 4.4) Completeness (%) 99.8 (98.5) 100 (100) 99.8 (100) 98.8 (93.4) 51.6 (98.5, 14.1) 11.4 (1.7) 12.0 (1.7) 14.9 (1.5) 13.1 (1.9) 4.6 (4.1, 2.2) Rmerge (%) 14.8 (158.3) 9.3 (98.0) 6.2 (98.9) 29.8 (142.2) 44.9 (40.5, 114.2) Rpim (%) 15.7 (55.3) 10.3 (109.0) 3.7 (53.8) 6.3 (40.0) 24.7 (23.9, 59.9) Refinement Rwork (%) 17.9 18.4 21.6 20.2 32.1 Rfree (%) 22.7 23.2 30.7 27.1 35.5 No. of Non-Hydrogen Atoms Protein 2,260 2,301 2,102 2,305 7,730 N-glycans 42 42 28 28 0 Water 79 54 0 2 0 Ligands 6 6 2 5 0 Average B factor (Å2) Protein 63 65 108 84 – N-glycans 35 46 102 18 – Water 68 85 – 75 – Ligands 36 47 91 75 66 RMSD from Ideality Bond lengths (Å) 0.020 0.016 0.019 0.016 0.004 Bond angles (°) 2.050 1.748 1.952 1.796 0.770 Ramachandran Plot Favored (%) 96.8 95.5 96.9 94.9 92.3 Allowed (%) 99.7 100.0 100.0 99.7 99.8 Number of outliers 1 0 0 1 2 PDB code 5FWS 5FWT 5FWU 5FWV 5FWW " TABLE 29 32 ECD structure_element " KRM1ECD KRM1ECD KRM1ECD KRM1ECD LRP6PE3PE4-DKKCRD2-KRM1ECD Crystal form I I II III I X-ray source Diamond i04 Diamond i03 Diamond i03 Diamond i04 Diamond i04 Wavelength (Å) 0.9793 0.9700 0.9700 0.9795 0.9795 Space group P3121 P3121 P43 P41212 C2221 Unit cell a/α (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 86.9/90 b/β (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 100.1/90 c/γ (Å/°) 188.4/120 187.4/120 75.0/90 198.2/90 270.7/90 Wilson B factor (Å2) 31 41 76 77 NA Resolution range (Å) 47.10–1.90 (1.95–1.90) 62.47–2.10 (2.16–2.10) 75.00–2.80 (2.99–2.80) 67.80–3.20 (3.42–3.20) 67.68–3.50 (7.16–6.40, 3.92–3.50) Unique reflections 23,300 (1,524) 17,089 (1,428) 7,964 (1,448) 8,171 (1,343) 8,070 (723, 645) Average multiplicity 9.1 (9.2) 5.2 (5.3) 3.7 (3.7) 22.7 (12.6) 3.8 (3.5, 4.4) Completeness (%) 99.8 (98.5) 100 (100) 99.8 (100) 98.8 (93.4) 51.6 (98.5, 14.1) 11.4 (1.7) 12.0 (1.7) 14.9 (1.5) 13.1 (1.9) 4.6 (4.1, 2.2) Rmerge (%) 14.8 (158.3) 9.3 (98.0) 6.2 (98.9) 29.8 (142.2) 44.9 (40.5, 114.2) Rpim (%) 15.7 (55.3) 10.3 (109.0) 3.7 (53.8) 6.3 (40.0) 24.7 (23.9, 59.9) Refinement Rwork (%) 17.9 18.4 21.6 20.2 32.1 Rfree (%) 22.7 23.2 30.7 27.1 35.5 No. of Non-Hydrogen Atoms Protein 2,260 2,301 2,102 2,305 7,730 N-glycans 42 42 28 28 0 Water 79 54 0 2 0 Ligands 6 6 2 5 0 Average B factor (Å2) Protein 63 65 108 84 – N-glycans 35 46 102 18 – Water 68 85 – 75 – Ligands 36 47 91 75 66 RMSD from Ideality Bond lengths (Å) 0.020 0.016 0.019 0.016 0.004 Bond angles (°) 2.050 1.748 1.952 1.796 0.770 Ramachandran Plot Favored (%) 96.8 95.5 96.9 94.9 92.3 Allowed (%) 99.7 100.0 100.0 99.7 99.8 Number of outliers 1 0 0 1 2 PDB code 5FWS 5FWT 5FWU 5FWV 5FWW " TABLE 33 59 LRP6PE3PE4-DKKCRD2-KRM1ECD complex_assembly " KRM1ECD KRM1ECD KRM1ECD KRM1ECD LRP6PE3PE4-DKKCRD2-KRM1ECD Crystal form I I II III I X-ray source Diamond i04 Diamond i03 Diamond i03 Diamond i04 Diamond i04 Wavelength (Å) 0.9793 0.9700 0.9700 0.9795 0.9795 Space group P3121 P3121 P43 P41212 C2221 Unit cell a/α (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 86.9/90 b/β (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 100.1/90 c/γ (Å/°) 188.4/120 187.4/120 75.0/90 198.2/90 270.7/90 Wilson B factor (Å2) 31 41 76 77 NA Resolution range (Å) 47.10–1.90 (1.95–1.90) 62.47–2.10 (2.16–2.10) 75.00–2.80 (2.99–2.80) 67.80–3.20 (3.42–3.20) 67.68–3.50 (7.16–6.40, 3.92–3.50) Unique reflections 23,300 (1,524) 17,089 (1,428) 7,964 (1,448) 8,171 (1,343) 8,070 (723, 645) Average multiplicity 9.1 (9.2) 5.2 (5.3) 3.7 (3.7) 22.7 (12.6) 3.8 (3.5, 4.4) Completeness (%) 99.8 (98.5) 100 (100) 99.8 (100) 98.8 (93.4) 51.6 (98.5, 14.1) 11.4 (1.7) 12.0 (1.7) 14.9 (1.5) 13.1 (1.9) 4.6 (4.1, 2.2) Rmerge (%) 14.8 (158.3) 9.3 (98.0) 6.2 (98.9) 29.8 (142.2) 44.9 (40.5, 114.2) Rpim (%) 15.7 (55.3) 10.3 (109.0) 3.7 (53.8) 6.3 (40.0) 24.7 (23.9, 59.9) Refinement Rwork (%) 17.9 18.4 21.6 20.2 32.1 Rfree (%) 22.7 23.2 30.7 27.1 35.5 No. of Non-Hydrogen Atoms Protein 2,260 2,301 2,102 2,305 7,730 N-glycans 42 42 28 28 0 Water 79 54 0 2 0 Ligands 6 6 2 5 0 Average B factor (Å2) Protein 63 65 108 84 – N-glycans 35 46 102 18 – Water 68 85 – 75 – Ligands 36 47 91 75 66 RMSD from Ideality Bond lengths (Å) 0.020 0.016 0.019 0.016 0.004 Bond angles (°) 2.050 1.748 1.952 1.796 0.770 Ramachandran Plot Favored (%) 96.8 95.5 96.9 94.9 92.3 Allowed (%) 99.7 100.0 100.0 99.7 99.8 Number of outliers 1 0 0 1 2 PDB code 5FWS 5FWT 5FWU 5FWV 5FWW " TABLE 1295 1300 Water chemical " KRM1ECD KRM1ECD KRM1ECD KRM1ECD LRP6PE3PE4-DKKCRD2-KRM1ECD Crystal form I I II III I X-ray source Diamond i04 Diamond i03 Diamond i03 Diamond i04 Diamond i04 Wavelength (Å) 0.9793 0.9700 0.9700 0.9795 0.9795 Space group P3121 P3121 P43 P41212 C2221 Unit cell a/α (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 86.9/90 b/β (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 100.1/90 c/γ (Å/°) 188.4/120 187.4/120 75.0/90 198.2/90 270.7/90 Wilson B factor (Å2) 31 41 76 77 NA Resolution range (Å) 47.10–1.90 (1.95–1.90) 62.47–2.10 (2.16–2.10) 75.00–2.80 (2.99–2.80) 67.80–3.20 (3.42–3.20) 67.68–3.50 (7.16–6.40, 3.92–3.50) Unique reflections 23,300 (1,524) 17,089 (1,428) 7,964 (1,448) 8,171 (1,343) 8,070 (723, 645) Average multiplicity 9.1 (9.2) 5.2 (5.3) 3.7 (3.7) 22.7 (12.6) 3.8 (3.5, 4.4) Completeness (%) 99.8 (98.5) 100 (100) 99.8 (100) 98.8 (93.4) 51.6 (98.5, 14.1) 11.4 (1.7) 12.0 (1.7) 14.9 (1.5) 13.1 (1.9) 4.6 (4.1, 2.2) Rmerge (%) 14.8 (158.3) 9.3 (98.0) 6.2 (98.9) 29.8 (142.2) 44.9 (40.5, 114.2) Rpim (%) 15.7 (55.3) 10.3 (109.0) 3.7 (53.8) 6.3 (40.0) 24.7 (23.9, 59.9) Refinement Rwork (%) 17.9 18.4 21.6 20.2 32.1 Rfree (%) 22.7 23.2 30.7 27.1 35.5 No. of Non-Hydrogen Atoms Protein 2,260 2,301 2,102 2,305 7,730 N-glycans 42 42 28 28 0 Water 79 54 0 2 0 Ligands 6 6 2 5 0 Average B factor (Å2) Protein 63 65 108 84 – N-glycans 35 46 102 18 – Water 68 85 – 75 – Ligands 36 47 91 75 66 RMSD from Ideality Bond lengths (Å) 0.020 0.016 0.019 0.016 0.004 Bond angles (°) 2.050 1.748 1.952 1.796 0.770 Ramachandran Plot Favored (%) 96.8 95.5 96.9 94.9 92.3 Allowed (%) 99.7 100.0 100.0 99.7 99.8 Number of outliers 1 0 0 1 2 PDB code 5FWS 5FWT 5FWU 5FWV 5FWW " TABLE 1417 1422 Water chemical " KRM1ECD KRM1ECD KRM1ECD KRM1ECD LRP6PE3PE4-DKKCRD2-KRM1ECD Crystal form I I II III I X-ray source Diamond i04 Diamond i03 Diamond i03 Diamond i04 Diamond i04 Wavelength (Å) 0.9793 0.9700 0.9700 0.9795 0.9795 Space group P3121 P3121 P43 P41212 C2221 Unit cell a/α (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 86.9/90 b/β (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 100.1/90 c/γ (Å/°) 188.4/120 187.4/120 75.0/90 198.2/90 270.7/90 Wilson B factor (Å2) 31 41 76 77 NA Resolution range (Å) 47.10–1.90 (1.95–1.90) 62.47–2.10 (2.16–2.10) 75.00–2.80 (2.99–2.80) 67.80–3.20 (3.42–3.20) 67.68–3.50 (7.16–6.40, 3.92–3.50) Unique reflections 23,300 (1,524) 17,089 (1,428) 7,964 (1,448) 8,171 (1,343) 8,070 (723, 645) Average multiplicity 9.1 (9.2) 5.2 (5.3) 3.7 (3.7) 22.7 (12.6) 3.8 (3.5, 4.4) Completeness (%) 99.8 (98.5) 100 (100) 99.8 (100) 98.8 (93.4) 51.6 (98.5, 14.1) 11.4 (1.7) 12.0 (1.7) 14.9 (1.5) 13.1 (1.9) 4.6 (4.1, 2.2) Rmerge (%) 14.8 (158.3) 9.3 (98.0) 6.2 (98.9) 29.8 (142.2) 44.9 (40.5, 114.2) Rpim (%) 15.7 (55.3) 10.3 (109.0) 3.7 (53.8) 6.3 (40.0) 24.7 (23.9, 59.9) Refinement Rwork (%) 17.9 18.4 21.6 20.2 32.1 Rfree (%) 22.7 23.2 30.7 27.1 35.5 No. of Non-Hydrogen Atoms Protein 2,260 2,301 2,102 2,305 7,730 N-glycans 42 42 28 28 0 Water 79 54 0 2 0 Ligands 6 6 2 5 0 Average B factor (Å2) Protein 63 65 108 84 – N-glycans 35 46 102 18 – Water 68 85 – 75 – Ligands 36 47 91 75 66 RMSD from Ideality Bond lengths (Å) 0.020 0.016 0.019 0.016 0.004 Bond angles (°) 2.050 1.748 1.952 1.796 0.770 Ramachandran Plot Favored (%) 96.8 95.5 96.9 94.9 92.3 Allowed (%) 99.7 100.0 100.0 99.7 99.8 Number of outliers 1 0 0 1 2 PDB code 5FWS 5FWT 5FWU 5FWV 5FWW " TABLE 1466 1470 RMSD evidence " KRM1ECD KRM1ECD KRM1ECD KRM1ECD LRP6PE3PE4-DKKCRD2-KRM1ECD Crystal form I I II III I X-ray source Diamond i04 Diamond i03 Diamond i03 Diamond i04 Diamond i04 Wavelength (Å) 0.9793 0.9700 0.9700 0.9795 0.9795 Space group P3121 P3121 P43 P41212 C2221 Unit cell a/α (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 86.9/90 b/β (Å/°) 50.9/90 50.5/90 65.8/90 67.8/90 100.1/90 c/γ (Å/°) 188.4/120 187.4/120 75.0/90 198.2/90 270.7/90 Wilson B factor (Å2) 31 41 76 77 NA Resolution range (Å) 47.10–1.90 (1.95–1.90) 62.47–2.10 (2.16–2.10) 75.00–2.80 (2.99–2.80) 67.80–3.20 (3.42–3.20) 67.68–3.50 (7.16–6.40, 3.92–3.50) Unique reflections 23,300 (1,524) 17,089 (1,428) 7,964 (1,448) 8,171 (1,343) 8,070 (723, 645) Average multiplicity 9.1 (9.2) 5.2 (5.3) 3.7 (3.7) 22.7 (12.6) 3.8 (3.5, 4.4) Completeness (%) 99.8 (98.5) 100 (100) 99.8 (100) 98.8 (93.4) 51.6 (98.5, 14.1) 11.4 (1.7) 12.0 (1.7) 14.9 (1.5) 13.1 (1.9) 4.6 (4.1, 2.2) Rmerge (%) 14.8 (158.3) 9.3 (98.0) 6.2 (98.9) 29.8 (142.2) 44.9 (40.5, 114.2) Rpim (%) 15.7 (55.3) 10.3 (109.0) 3.7 (53.8) 6.3 (40.0) 24.7 (23.9, 59.9) Refinement Rwork (%) 17.9 18.4 21.6 20.2 32.1 Rfree (%) 22.7 23.2 30.7 27.1 35.5 No. of Non-Hydrogen Atoms Protein 2,260 2,301 2,102 2,305 7,730 N-glycans 42 42 28 28 0 Water 79 54 0 2 0 Ligands 6 6 2 5 0 Average B factor (Å2) Protein 63 65 108 84 – N-glycans 35 46 102 18 – Water 68 85 – 75 – Ligands 36 47 91 75 66 RMSD from Ideality Bond lengths (Å) 0.020 0.016 0.019 0.016 0.004 Bond angles (°) 2.050 1.748 1.952 1.796 0.770 Ramachandran Plot Favored (%) 96.8 95.5 96.9 94.9 92.3 Allowed (%) 99.7 100.0 100.0 99.7 99.8 Number of outliers 1 0 0 1 2 PDB code 5FWS 5FWT 5FWU 5FWV 5FWW " TABLE 99 115 diffraction data evidence An additional shell given for the ternary complex corresponds to the last shell with near-complete diffraction data. TABLE